RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MT-CO2P00403 227 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 IGKV1-39P01597 117 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 IGKV1D-39P04432 117 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 EIF4EP06730 217 aaKnown RBP6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 F2RP25116 425 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 G6PCP35575 357 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 GNG2P59768 71 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 CATR1Q13166 79 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 C22orf42Q6IC83 251 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 TMED4Q7Z7H5 227 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 DMBX1Q8NFW5 382 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 STXBP6Q8NFX7 210 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 LGALS14Q8TCE9 139 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 SLC25A46Q96AG3 418 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 CLUHP3Q96NS8 147 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 C7orf50Q9BRJ6 194 aaKnown RBP6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 SCN3BQ9NY72 215 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 MRPL36Q9P0J6 103 aaKnown RBP6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 ANAPC10Q9UM13 185 aa6.81□□□□□ -1.32
HDGFL3-204ENST00000563790 PLAC8L1A1L4L8 177 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 CYB5BO43169 146 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 YIF1AO95070 293 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 KRASP01116 189 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 RLN1P04808 185 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 MFAP4P55083 255 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 AQP4P55087 323 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 FXYD7P58549 80 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 FXYD4P59646 89 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 KRTAP20-1Q3LI63 56 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 PSMG4Q5JS54 123 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 AADACL3Q5VUY0 350 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 DHRS11Q6UWP2 260 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 C10orf126Q8N4M7 172 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 ZNF709Q8N972 641 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 OR5H6Q8NGV6 325 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 NRG4Q8WWG1 115 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 SEC22AQ96IW7 307 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 HINT2Q9BX68 163 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 RHBDL2Q9NX52 303 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 TPRKBQ9Y3C4 175 aa6.8□□□□□ -1.32
HDGFL3-204ENST00000563790 HLA-DRB4P13762 266 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 MYL9P24844 172 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 CRYBB3P26998 211 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 TSPOP30536 169 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 LPAR6P43657 344 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 ARPC4P59998 168 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 SPCS2Q15005 226 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 REG3GQ6UW15 175 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 TMEM17Q86X19 198 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 OR5AP2Q8NGF4 316 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 MOB3AQ96BX8 217 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 FXYD6Q9H0Q3 95 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 AUNIPQ9H7T9 357 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 TXNL4BQ9NX01 149 aaKnown RBP6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 PRNDQ9UKY0 176 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 U3KQE9 123 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 HLA-DRB4X5D2U9 266 aa6.79□□□□□ -1.32
HDGFL3-204ENST00000563790 C9JCJ5 164 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 SCGNO76038 276 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 TMEM50AO95807 157 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 IGKV1-17P01599 117 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 CRYGDP07320 174 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 PRCDQ00LT1 54 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 SFXN4Q6P4A7 337 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 ZNF600Q6ZNG1 722 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 MISP3Q96FF7 219 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 TMEM56Q96MV1 263 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 GINS3Q9BRX5 216 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 DAPK2Q9UIK4 370 aa6.78□□□□□ -1.32
HDGFL3-204ENST00000563790 TRAV18A0A075B6X5 111 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 HELTA6NFD8 242 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 INS-IGF2F8WCM5 200 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 GNG7O60262 68 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 CLEC2LP0C7M8 214 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 P2RY1P47900 373 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 RFX2P48378 723 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 PPP5CP53041 499 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 ERVK-16P61578 105 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 OR10J6PQ8NGY7 276 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 CCDC90BQ9GZT6 254 aa6.77□□□□□ -1.33
HDGFL3-204ENST00000563790 A0A0A6YYH2 397 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 RBFOX3A6NFN3 312 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 A6NJ64 397 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 PRM2P04554 102 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 CFC1BP0CG36 223 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 NAT1P18440 290 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 SCAND1P57086 179 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 MLANAQ16655 118 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 IZUMO4Q1ZYL8 232 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 FKBP11Q9NYL4 201 aa6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 RRP15Q9Y3B9 282 aaKnown RBP6.76□□□□□ -1.33
HDGFL3-204ENST00000563790 MEIS3P1A6NDR6 274 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 ZNF705GA8MUZ8 300 aaPredicted RBP6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 SNAPC5O75971 98 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 RNASE2P10153 161 aaKnown RBP6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 NPPCP23582 126 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 SDC2P34741 201 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 HSPE1P61604 102 aaKnown RBP6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 BSXQ3C1V8 233 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 FFAR4Q5NUL3 377 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms