RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 NDUFB6O95139 128 aa7.33□□□□□ -1.24
SF3B3-204ENST00000563739 ZNF688P0C7X2 276 aa7.33□□□□□ -1.24
SF3B3-204ENST00000563739 RELQ04864 619 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-204ENST00000563739 ZNF705AQ6ZN79 300 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-204ENST00000563739 OR1P1Q8NH06 330 aa7.33□□□□□ -1.24
SF3B3-204ENST00000563739 GRAMD2BQ96HH9 432 aa7.33□□□□□ -1.24
SF3B3-204ENST00000563739 FAM212BQ9NTI7 297 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-204ENST00000563739 TMEM14BQ9NUH8 114 aa7.33□□□□□ -1.24
SF3B3-204ENST00000563739 C14orf166Q9Y224 244 aaKnown RBP7.33□□□□□ -1.24
SF3B3-204ENST00000563739 ZNF705FA8MVS1 300 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-204ENST00000563739 YIF1AO95070 293 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 MT-CO2P00403 227 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 IL5P05113 134 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 ZNF705DP0CH99 300 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-204ENST00000563739 ZNF705BP0CI00 300 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-204ENST00000563739 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 ERVK-16P61578 105 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 RNF212Q495C1 297 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 TMEM41BQ5BJD5 291 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 HSD17B13Q7Z5P4 300 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-204ENST00000563739 TCTE3Q8IZS6 198 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 ZNF114Q8NC26 417 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 AIFM2Q9BRQ8 373 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 RTBDNQ9BSG5 229 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-204ENST00000563739 MED28Q9H204 178 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 GPR132Q9UNW8 380 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 FLVCR2Q9UPI3 526 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 OR51B2Q9Y5P1 312 aa7.32□□□□□ -1.24
SF3B3-204ENST00000563739 PUS1Q9Y606 427 aaKnown RBP eCLIP7.32□□□□□ -1.24
SF3B3-204ENST00000563739 C3orf85A0A1B0GTC6 90 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 IFNA10P01566 189 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 IGKV1-39P01597 117 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 IGKV1D-39P04432 117 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 LPAR6P43657 344 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 MFAP4P55083 255 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 DEFB1P60022 68 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 FCN2Q15485 313 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 ACTL10Q5JWF8 245 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 DMBX1Q8NFW5 382 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 TMEM230Q96A57 120 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 SCGB3A2Q96PL1 93 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 TP53RKQ96S44 253 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 TXN2Q99757 166 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 HINT2Q9BX68 163 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 KRTAP1-5Q9BYS1 174 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 NAA60Q9H7X0 242 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 RABAC1Q9UI14 185 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 U3KQE9 123 aa7.31□□□□□ -1.24
SF3B3-204ENST00000563739 CRYM-AS1A6NIL9 109 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 B3GALNT1O75752 331 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 KRASP01116 189 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 OR5AC1P0C628 307 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 UCP1P25874 307 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 G6PCP35575 357 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 ZFP69Q49AA0 526 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 STXBP6Q8NFX7 210 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 ZNRF2Q8NHG8 242 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 MISP3Q96FF7 219 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 NEU1Q99519 415 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 SLC25A21Q9BQT8 299 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-204ENST00000563739 XCL2Q9UBD3 114 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 DKK2Q9UBU2 259 aa7.3□□□□□ -1.24
SF3B3-204ENST00000563739 TEX13DA0A0J9YY54 714 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-204ENST00000563739 SNRPGP15A8MWD9 76 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 DNASE2O00115 360 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-204ENST00000563739 C1QBP02746 253 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 SULT1A3P0DMM9 295 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 SULT1A4P0DMN0 295 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 CRYBB3P26998 211 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 P2RY1P47900 373 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 PAFAH1B2P68402 229 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 SP6Q3SY56 376 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 GDF5OSQ5U4N7 250 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 TMEM88Q6PEY1 159 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 ZNF600Q6ZNG1 722 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 TMED4Q7Z7H5 227 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 NOXA1Q86UR1 476 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 UBE2DNLQ8IWF7 75 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 ZBTB8BQ8NAP8 495 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-204ENST00000563739 OR11H7Q8NGC8 314 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 GLMPQ8WWB7 406 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 SEC22AQ96IW7 307 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 FAM210BQ96KR6 192 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 RAB40CQ96S21 281 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 SEC22CQ9BRL7 303 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 TMEM222Q9H0R3 208 aa7.29□□□□□ -1.24
SF3B3-204ENST00000563739 FNDC4Q9H6D8 234 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-204ENST00000563739 GPN1Q9HCN4 374 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-204ENST00000563739 NBDYA0A0U1RRE5 68 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 H3BMM0 161 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 CYB5BO43169 146 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 GNG7O60262 68 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 TMEM50AO95807 157 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 IGKV1-17P01599 117 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 IGKV1-5P01602 117 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 CD5P06127 495 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 P0C879 139 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 ANXA7P20073 488 aaKnown RBP7.28□□□□□ -1.24
SF3B3-204ENST00000563739 AKR1C2P52895 323 aa7.28□□□□□ -1.24
SF3B3-204ENST00000563739 NKX2-5P52952 324 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms