RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 GLI3P10071 1580 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 ALPK2Q86TB3 2170 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 BAZ2BQ9UIF8 2168 aaKnown RBP0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 MED12LQ86YW9 2145 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 OBSL1O75147 1896 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 COL4A5P29400 1685 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 TRAV5A0A0B4J249 113 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 G3V2T6 193 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 TAX1BP3O14907 124 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 ORC5O43913 435 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 MFSD11O43934 449 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 APOA2P02652 100 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 GPX1P07203 203 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 SMIM17P0DL12 118 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 DEFA4P12838 97 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 IDO1P14902 403 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 GPX2P18283 190 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 SERPINB1P30740 379 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 RHOBP62745 196 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 GNG5P63218 68 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 EIF5AP63241 154 aaKnown RBP0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 SLC38A11Q08AI6 406 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 ZNF846Q147U1 533 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 KHDC3LQ587J8 217 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 TRIQKQ629K1 86 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 C3orf33Q6P1S2 294 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 TOMM20LQ6UXN7 152 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 C7orf65Q6ZTY9 151 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 PHF5AQ7RTV0 110 aaKnown RBP0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 COA5Q86WW8 74 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 LRRC28Q86X40 367 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 CLVS1Q8IUQ0 354 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 STX19Q8N4C7 294 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 C3orf56Q8N813 242 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 OR52R1Q8NGF1 315 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 TEX47Q8TBZ9 253 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 WFDC5Q8TCV5 224 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 ZHX1-C8orf76Q96EF9 292 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 PCBD2Q9H0N5 130 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 CST9LQ9H4G1 147 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 MED9Q9NWA0 146 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 GID8Q9NWU2 228 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 UFC1Q9Y3C8 167 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 TRPM1Q7Z4N2 1603 aa0.7□□□□□ -2.3
HMGB1P33-201ENST00000563485 UNC13AQ9UPW8 1703 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 NISCHQ9Y2I1 1504 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 DIDO1Q9BTC0 2240 aaKnown RBP0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 ADGBQ8N7X0 1667 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 ECM29Q5VYK3 1845 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 EML6Q6ZMW3 1958 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 RIMBP3CA6NJZ7 1639 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 RIMBP3BA6NNM3 1639 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 RIMBP3Q9UFD9 1639 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 TLCD2A6NGC4 264 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 RIIAD1A6NNX1 92 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 A8MWV9 139 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 FABP1P07148 127 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 SRP14P37108 136 aaKnown RBP0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 EIF2B2P49770 351 aaKnown RBP0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 TAS2R41P59536 307 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 DEFA1P59665 94 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 DR1Q01658 176 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 TMEM155Q4W5P6 130 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 BCL2L15Q5TBC7 163 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 FP248Q71RG6 208 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 RPS19BP1Q86WX3 136 aaKnown RBP0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 BPIFA4PQ86YQ2 179 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 EXOC3-AS1Q8N2X6 119 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 SMIM20Q8N5G0 67 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 C12orf29Q8N999 325 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 WFDC11Q8NEX6 87 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 OR2T10Q8NGZ9 312 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 DNAJC9Q8WXX5 260 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 GPER1Q99527 375 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 HOPXQ9BPY8 73 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 GINS4Q9BRT9 223 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 TRABDQ9H4I3 376 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 C14orf132Q9NPU4 83 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 SLC35A3Q9Y2D2 325 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 UTP11Q9Y3A2 253 aaKnown RBP0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 MYH7BA7E2Y1 1941 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 MYH2Q9UKX2 1941 aa0.69□□□□□ -2.3
HMGB1P33-201ENST00000563485 A0A087WSZ3 146 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 TRAV12-1A0A0B4J245 112 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 A0A1B0GV72 72 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 CLDN25C9JDP6 229 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 PGRMC1O00264 195 aaKnown RBP0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 GPR31O00270 319 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 ADGRB2O60241 1585 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 OR1I1O60431 355 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 PFDN1O60925 122 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 PROSCO94903 275 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 UBL3O95164 117 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 IFNA14P01570 189 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 CRYGAP11844 174 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 RNASE3P12724 160 aaKnown RBP0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 HLA-EP13747 358 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 OGNP20774 298 aaKnown RBP0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 FKBP2P26885 142 aaKnown RBP0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 UBE2BP63146 152 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms