RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 OR51G1Q8NGK1 321 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 RNF125Q96EQ8 232 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 C7orf50Q9BRJ6 194 aaKnown RBP10.31□□□□□ -0.76
SMPD3-204ENST00000563396 C11orf68Q9H3H3 251 aaKnown RBP10.31□□□□□ -0.76
SMPD3-204ENST00000563396 HYDINQ4G0P3 5121 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 C9orf170A2RU37 121 aa10.3□□□□□ -0.76
SMPD3-204ENST00000563396 MED6O75586 246 aa10.3□□□□□ -0.76
SMPD3-204ENST00000563396 JTBO76095 146 aa10.3□□□□□ -0.76
SMPD3-204ENST00000563396 RD3LP0DJH9 198 aa10.3□□□□□ -0.76
SMPD3-204ENST00000563396 AP2S1P53680 142 aaPredicted RBP10.3□□□□□ -0.76
SMPD3-204ENST00000563396 GAMTQ14353 236 aa10.3□□□□□ -0.76
SMPD3-204ENST00000563396 SLC35E1Q96K37 410 aa10.3□□□□□ -0.76
SMPD3-204ENST00000563396 CIB3Q96Q77 187 aaPredicted RBP10.3□□□□□ -0.76
SMPD3-204ENST00000563396 SEPSECSQ9HD40 501 aaKnown RBP10.3□□□□□ -0.76
SMPD3-204ENST00000563396 AGRNO00468 2067 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 IGKV1OR2-108A0A075B7D4 117 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 NUPR2A6NF83 97 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 SYNGR2O43760 224 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 CA1P00915 261 aaPredicted RBP10.29□□□□□ -0.76
SMPD3-204ENST00000563396 ZNF688P0C7X2 276 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 IAPPP10997 89 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 IL7P13232 177 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 RAB11AP62491 216 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 DHRS2Q13268 280 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 TMEM41BQ5BJD5 291 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 TMEM217Q8N7C4 229 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 THAP8Q8NA92 274 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 NRN1Q9NPD7 142 aa10.29□□□□□ -0.76
SMPD3-204ENST00000563396 ZFP92A6NM28 416 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 HOXB5P09067 269 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 SPP1P10451 314 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 INPP1P49441 399 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 ZNF90Q03938 601 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 SIGLEC15Q6ZMC9 328 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 STHQ8IWL8 128 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 TRGV9Q99603 122 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 NDUFA13Q9P0J0 144 aa10.28□□□□□ -0.76
SMPD3-204ENST00000563396 ADAP1O75689 374 aa10.27□□□□□ -0.77
SMPD3-204ENST00000563396 FABP1P07148 127 aa10.27□□□□□ -0.77
SMPD3-204ENST00000563396 GIG44P09565 113 aaPredicted RBP10.27□□□□□ -0.77
SMPD3-204ENST00000563396 OR4E1P0C645 316 aa10.27□□□□□ -0.77
SMPD3-204ENST00000563396 C4BPBP20851 252 aa10.27□□□□□ -0.77
SMPD3-204ENST00000563396 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
SMPD3-204ENST00000563396 OR4D5Q8NGN0 318 aa10.27□□□□□ -0.77
SMPD3-204ENST00000563396 COQ8AQ8NI60 647 aa10.27□□□□□ -0.77
SMPD3-204ENST00000563396 RARRES2Q99969 163 aa10.27□□□□□ -0.77
SMPD3-204ENST00000563396 FLVCR2Q9UPI3 526 aa10.27□□□□□ -0.77
SMPD3-204ENST00000563396 RPP30P78346 268 aaKnown RBP10.26□□□□□ -0.77
SMPD3-204ENST00000563396 ID3Q02535 119 aa10.26□□□□□ -0.77
SMPD3-204ENST00000563396 PMS2P11Q13670 270 aa10.26□□□□□ -0.77
SMPD3-204ENST00000563396 CNPY1Q3B7I2 92 aa10.26□□□□□ -0.77
SMPD3-204ENST00000563396 C1orf194Q5T5A4 169 aa10.26□□□□□ -0.77
SMPD3-204ENST00000563396 OR11H2Q8NH07 326 aa10.26□□□□□ -0.77
SMPD3-204ENST00000563396 MAGT1Q9H0U3 335 aa10.26□□□□□ -0.77
SMPD3-204ENST00000563396 CXorf65A6NEN9 183 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 KNCNA6PVL3 124 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 CENPXA8MT69 81 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 ZNF705EA8MWA4 302 aaPredicted RBP10.25□□□□□ -0.77
SMPD3-204ENST00000563396 WRBO00258 174 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 SNRPD3P62318 126 aaKnown RBP10.25□□□□□ -0.77
SMPD3-204ENST00000563396 PSMG4Q5JS54 123 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 ACOT7LQ6ZUV0 252 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 Q8NAQ8 132 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 LINC00476Q8WZB0 136 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 PBDC1Q9BVG4 233 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 FBXL17Q9UF56 701 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 PFDN2Q9UHV9 154 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 SLC45A2Q9UMX9 530 aa10.25□□□□□ -0.77
SMPD3-204ENST00000563396 H3BP45 60 aa10.24□□□□□ -0.77
SMPD3-204ENST00000563396 SOCS3O14543 225 aa10.24□□□□□ -0.77
SMPD3-204ENST00000563396 CFDP00746 253 aaPredicted RBP10.24□□□□□ -0.77
SMPD3-204ENST00000563396 ANXA7P20073 488 aaKnown RBP10.24□□□□□ -0.77
SMPD3-204ENST00000563396 LYZP61626 148 aa10.24□□□□□ -0.77
SMPD3-204ENST00000563396 POLR2GP62487 172 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMPD3-204ENST00000563396 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
SMPD3-204ENST00000563396 CSNK1G2-AS1Q8NCQ2 148 aa10.24□□□□□ -0.77
SMPD3-204ENST00000563396 MITD1Q8WV92 249 aa10.24□□□□□ -0.77
SMPD3-204ENST00000563396 C20orf85Q9H1P6 137 aa10.24□□□□□ -0.77
SMPD3-204ENST00000563396 STRAPQ9Y3F4 350 aaKnown RBP10.24□□□□□ -0.77
SMPD3-204ENST00000563396 PMS2P5A8MQ11 134 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 SNRPGP15A8MWD9 76 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 PLA2G10O15496 165 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 NKX2-1P43699 371 aaPredicted RBP10.23□□□□□ -0.77
SMPD3-204ENST00000563396 C4orf46Q504U0 113 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 ACTL10Q5JWF8 245 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 SPANXN5Q5MJ07 72 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 LINC00299Q6ZSB3 139 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 RAB40CQ96S21 281 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
SMPD3-204ENST00000563396 EPPK1P58107 5090 aaKnown RBP10.22□□□□□ -0.77
SMPD3-204ENST00000563396 LINC00854A0A1B0GVQ3 168 aa10.22□□□□□ -0.77
SMPD3-204ENST00000563396 LYRM1O43325 122 aa10.22□□□□□ -0.77
SMPD3-204ENST00000563396 IFNA21P01568 189 aa10.22□□□□□ -0.77
SMPD3-204ENST00000563396 PSMB3P49720 205 aa10.22□□□□□ -0.77
SMPD3-204ENST00000563396 OR2F1Q13607 317 aa10.22□□□□□ -0.77
SMPD3-204ENST00000563396 TMEM14EPQ6UXP3 125 aa10.22□□□□□ -0.77
SMPD3-204ENST00000563396 CCDC32Q9BV29 185 aa10.22□□□□□ -0.77
SMPD3-204ENST00000563396 WDR12Q9GZL7 423 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms