RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 IGHV1-69-2A0A0G2JMI3 117 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 A0A0J9YY10 115 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 FAM236DA0A1B0GTK5 79 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 A0A1B0GX78 115 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 A0A1W2PQD3 144 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 GRIFINA4D1Z8 144 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 IFITM5A6NNB3 132 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 KNCNA6PVL3 124 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 A8MT66 165 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 BBIP1A8MTZ0 92 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 C9JAW5 83 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 H3BPC8 53 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 PIRO00625 290 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 CCL25O15444 150 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 IFNA7P01567 189 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 LGALS1P09382 135 aaKnown RBP1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 PAEPP09466 180 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 AKAIN1P0CW23 69 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 FAM236CP0DP71 79 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 KDELR1P24390 212 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 RPL27AP46776 148 aaKnown RBP1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 TAS2R20P59543 309 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 DEFA3P59666 94 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 S100A10P60903 97 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 RPS25P62851 125 aaKnown RBP1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 CDK6Q00534 326 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 HES1Q14469 280 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 MORN2Q502X0 79 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 HCP5Q6MZN7 132 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 SLC22A24Q8N4F4 322 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 OR51T1Q8NGJ9 327 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 PPTC7Q8NI37 304 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 GPR146Q96CH1 333 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 PLEKHB2Q96CS7 222 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 SLAMF6Q96DU3 332 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 C20orf166-AS1Q96NR2 134 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 ERMAPQ96PL5 475 aaPredicted RBP1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 MRPL57Q9BQC6 102 aaKnown RBP1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM147Q9BVK8 224 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 SPANXDQ9BXN6 97 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 OR8D2Q9GZM6 311 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 CHST6Q9GZX3 395 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 RERGLQ9H628 205 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 TUBA4BQ9H853 241 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 SCN3BQ9NY72 215 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 NAT8Q9UHE5 227 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 HIGD1AQ9Y241 93 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 SOX21Q9Y651 276 aaPredicted RBP1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM2Q9UHN6 1383 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 ARHGAP32A7KAX9 2087 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 AKAP12Q02952 1782 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 TNS3Q68CZ2 1445 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 NSD3Q9BZ95 1437 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 ABCC10Q5T3U5 1492 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 IFT140Q96RY7 1462 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 MYO16Q9Y6X6 1858 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 TRAV26-2A0A0B4J265 109 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 MEIS3P1A6NDR6 274 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 GGT3PA6NGU5 568 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 SIGLEC16A6NMB1 481 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 H3BT86 120 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 GNRH2O43555 120 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 DPM2O94777 84 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 HLA-DRB1P01911 266 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 CSN2P05814 226 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 SCTP09683 121 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 TRAPPC2P0DI81 140 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 TRAPPC2BP0DI82 140 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 RPS3P23396 243 aaKnown RBP eCLIP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 CSN1S1P47710 185 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 XCL1P47992 114 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 HINT1P49773 126 aaPredicted RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 POLR2HP52434 150 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 RPL26P61254 145 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 SNRPD2P62316 118 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 EIF5AP63241 154 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 PSG9Q00887 426 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 CAV1Q03135 178 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF846Q147U1 533 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF181Q2M3W8 571 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 SPANXN3Q5MJ09 141 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 IBA57Q5T440 356 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 BCL2L15Q5TBC7 163 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 GLT8D1Q68CQ7 371 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 EIF5AL1Q6IS14 154 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 SSX8Q7RTT4 187 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 MMGT1Q8N4V1 131 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 OR4X2Q8NGF9 303 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 OR51A4Q8NGJ6 313 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 OR4C16Q8NGL9 310 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 PP6455Q8WZ26 134 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 PRADC1Q9BSG0 188 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 SNHG12Q9BXW3 62 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM222Q9H0R3 208 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 TCEAL2Q9H3H9 227 aaPredicted RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 RPL26L1Q9UNX3 145 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 CYSLTR1Q9Y271 337 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 HS3ST2Q9Y278 367 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 CHD1O14646 1710 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms