RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 COQ8AQ8NI60 647 aa9.32□□□□□ -0.92
SF3B3-202ENST00000562722 RTBDNQ9BSG5 229 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-202ENST00000562722 SEPSECSQ9HD40 501 aaKnown RBP9.32□□□□□ -0.92
SF3B3-202ENST00000562722 HLA-DRB4X5D2U9 266 aa9.32□□□□□ -0.92
SF3B3-202ENST00000562722 TMEM189A5PLL7 270 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 GABARAPH6UMI1 98 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 GABARAPO95166 117 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 SULT1A3P0DMM9 295 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 SULT1A4P0DMN0 295 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 PSG1P11464 419 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 ID1P41134 155 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 NKX2-1P43699 371 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-202ENST00000562722 SURF2Q15527 256 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-202ENST00000562722 OR4B1Q8NGF8 309 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 TMEM170AQ8WVE7 144 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 RNF125Q96EQ8 232 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 NAA50Q9GZZ1 169 aaKnown RBP9.31□□□□□ -0.92
SF3B3-202ENST00000562722 CACFD1Q9UGQ2 172 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 RFNGQ9Y644 331 aa9.31□□□□□ -0.92
SF3B3-202ENST00000562722 RYR1P21817 5038 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 DNAH17Q9UFH2 4485 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 IGLV2-18A0A075B6J9 118 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 A0A1B0GVY2 172 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 CRYM-AS1A6NIL9 109 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 ZFP92A6NM28 416 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 MED14OSP0DP75 135 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 HTN3P15516 51 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 DEFB1P60022 68 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 SSBP1Q04837 148 aaKnown RBP9.3□□□□□ -0.92
SF3B3-202ENST00000562722 KLF9Q13886 244 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-202ENST00000562722 GDF5OSQ5U4N7 250 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 ZNF705AQ6ZN79 300 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-202ENST00000562722 DTD1Q8TEA8 209 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 PPP1R14BQ96C90 147 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 NEU1Q99519 415 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 PRR13Q9NZ81 148 aa9.3□□□□□ -0.92
SF3B3-202ENST00000562722 SMIM9A6NGZ8 99 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 ZNF705FA8MVS1 300 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-202ENST00000562722 RTL8CO15255 209 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 ZNF705DP0CH99 300 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-202ENST00000562722 ZNF705BP0CI00 300 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-202ENST00000562722 LYZP61626 148 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 MRPS10P82664 201 aaKnown RBP9.29□□□□□ -0.92
SF3B3-202ENST00000562722 NMSQ5H8A3 153 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 FOXI2Q6ZQN5 318 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 LGI3Q8N145 548 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 SLC35E1Q96K37 410 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 PRRT1Q99946 306 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 C7orf50Q9BRJ6 194 aaKnown RBP9.29□□□□□ -0.92
SF3B3-202ENST00000562722 KCNIP3Q9Y2W7 256 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 TMEM56-RWDD3S4R434 201 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 U3KQ87 197 aa9.29□□□□□ -0.92
SF3B3-202ENST00000562722 DNAH11Q96DT5 4516 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 DYNC1H1Q14204 4646 aaKnown RBP9.28□□□□□ -0.92
SF3B3-202ENST00000562722 TEX48A0A1B0GUV7 120 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 FABP1P07148 127 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 AKAIN1P0CW23 69 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 PSMB3P49720 205 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 CTF1Q16619 201 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 LGALS9BQ3B8N2 356 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 FAM222AQ5U5X8 452 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 OR8G2PQ6IF36 304 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 EBLN2Q6P2I7 272 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 CLVS1Q8IUQ0 354 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-202ENST00000562722 OR51S1Q8NGJ8 323 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 OR4C16Q8NGL9 310 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 WDR12Q9GZL7 423 aaKnown RBP9.28□□□□□ -0.92
SF3B3-202ENST00000562722 MIXL1Q9H2W2 232 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 RBKSQ9H477 322 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 SAV1Q9H4B6 383 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-202ENST00000562722 GPR132Q9UNW8 380 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 GOLT1BQ9Y3E0 138 aa9.28□□□□□ -0.92
SF3B3-202ENST00000562722 PKHD1P08F94 4074 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 AKR1C4P17516 323 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 CCR6P51684 374 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 SUPT4H1P63272 117 aaKnown RBP9.27□□□□□ -0.93
SF3B3-202ENST00000562722 ZNF90Q03938 601 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 OR2F1Q13607 317 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 IL18Q14116 193 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 SMCO1Q147U7 214 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 SOHLH1Q5JUK2 328 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 GSG1LQ6UXU4 331 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 OR1S1Q8NH92 325 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 SMIM4Q8WVI0 70 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 IL22RA2Q969J5 263 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 FAM210BQ96KR6 192 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 SLC35B3Q9H1N7 401 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 DKK2Q9UBU2 259 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 HSPB7Q9UBY9 170 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 PAIP2BQ9ULR5 123 aaKnown RBP9.27□□□□□ -0.93
SF3B3-202ENST00000562722 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.93
SF3B3-202ENST00000562722 LOC102723971A0A1B0GUV8 181 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 HBE1P02100 147 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 PSG9Q00887 426 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 OR8I2Q8N0Y5 310 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 ZNF709Q8N972 641 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 TMEM208Q9BTX3 173 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 MCUBQ9NWR8 336 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms