RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 IL17DQ8TAD2 202 aa17.57■□□□□ 0.4
CDR2-202ENST00000561630 GLMPQ8WWB7 406 aa17.57■□□□□ 0.4
CDR2-202ENST00000561630 PAIP2BQ9ULR5 123 aaKnown RBP17.57■□□□□ 0.4
CDR2-202ENST00000561630 HELTA6NFD8 242 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 MPTX1A8MV57 137 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 K7EQG2 157 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 LYRM1O43325 122 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 IFNA21P01568 189 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 EIF2B2P49770 351 aaKnown RBP17.56■□□□□ 0.4
CDR2-202ENST00000561630 DEFB131AP59861 70 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 ID3Q02535 119 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 LINC00299Q6ZSB3 139 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 OR51G1Q8NGK1 321 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 DCANP1Q8TF63 244 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 RNF183Q96D59 192 aa17.56■□□□□ 0.4
CDR2-202ENST00000561630 ZNF90Q03938 601 aa17.55■□□□□ 0.4
CDR2-202ENST00000561630 RNF125Q96EQ8 232 aa17.55■□□□□ 0.4
CDR2-202ENST00000561630 CCDC32Q9BV29 185 aa17.55■□□□□ 0.4
CDR2-202ENST00000561630 CSTL1Q9H114 145 aa17.55■□□□□ 0.4
CDR2-202ENST00000561630 PRSS46E5RG02 174 aa17.54■□□□□ 0.4
CDR2-202ENST00000561630 BUB3O43684 328 aa17.54■□□□□ 0.4
CDR2-202ENST00000561630 AP2S1P53680 142 aaPredicted RBP17.54■□□□□ 0.4
CDR2-202ENST00000561630 C20orf85Q9H1P6 137 aa17.54■□□□□ 0.4
CDR2-202ENST00000561630 FABP1P07148 127 aa17.53■□□□□ 0.4
CDR2-202ENST00000561630 NKX2-1P43699 371 aaPredicted RBP17.53■□□□□ 0.4
CDR2-202ENST00000561630 POLR2GP62487 172 aaKnown RBP eCLIP17.53■□□□□ 0.4
CDR2-202ENST00000561630 SPANXN5Q5MJ07 72 aa17.53■□□□□ 0.4
CDR2-202ENST00000561630 LEMD1Q68G75 181 aa17.53■□□□□ 0.4
CDR2-202ENST00000561630 OR4D5Q8NGN0 318 aa17.53■□□□□ 0.4
CDR2-202ENST00000561630 MITD1Q8WV92 249 aa17.53■□□□□ 0.4
CDR2-202ENST00000561630 TRGV9Q99603 122 aa17.53■□□□□ 0.4
CDR2-202ENST00000561630 SACSQ9NZJ4 4579 aa17.52■□□□□ 0.4
CDR2-202ENST00000561630 IGKV1OR2-108A0A075B7D4 117 aa17.52■□□□□ 0.4
CDR2-202ENST00000561630 OR8G2PQ6IF36 304 aa17.52■□□□□ 0.4
CDR2-202ENST00000561630 THAP8Q8NA92 274 aa17.52■□□□□ 0.4
CDR2-202ENST00000561630 PBDC1Q9BVG4 233 aa17.52■□□□□ 0.4
CDR2-202ENST00000561630 STRAPQ9Y3F4 350 aaKnown RBP17.52■□□□□ 0.4
CDR2-202ENST00000561630 RYR2Q92736 4967 aa17.52■□□□□ 0.39
CDR2-202ENST00000561630 H3BP45 60 aa17.51■□□□□ 0.39
CDR2-202ENST00000561630 TCRBP04435 133 aa17.51■□□□□ 0.39
CDR2-202ENST00000561630 NUP62P37198 522 aaPredicted RBP17.51■□□□□ 0.39
CDR2-202ENST00000561630 PFDN2Q9UHV9 154 aa17.51■□□□□ 0.39
CDR2-202ENST00000561630 SNRPGP15A8MWD9 76 aa17.5■□□□□ 0.39
CDR2-202ENST00000561630 ZNF688P0C7X2 276 aa17.5■□□□□ 0.39
CDR2-202ENST00000561630 SIGLEC15Q6ZMC9 328 aa17.5■□□□□ 0.39
CDR2-202ENST00000561630 IAH1Q2TAA2 248 aaPredicted RBP17.49■□□□□ 0.39
CDR2-202ENST00000561630 NRN1Q9NPD7 142 aa17.49■□□□□ 0.39
CDR2-202ENST00000561630 LYSTQ99698 3801 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 A0A0J9YWU9 116 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 A6NHS1 94 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 SSSCA1O60232 199 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 LYZP61626 148 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 OR2F1Q13607 317 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 STHQ8IWL8 128 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 GATAD1Q8WUU5 269 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 S100ZQ8WXG8 99 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 SMIM8Q96KF7 97 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 NUDT15Q9NV35 164 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 PSENENQ9NZ42 101 aa17.48■□□□□ 0.39
CDR2-202ENST00000561630 TRAV6A0A075B6T7 132 aa17.47■□□□□ 0.39
CDR2-202ENST00000561630 ACOT7LQ6ZUV0 252 aa17.47■□□□□ 0.39
CDR2-202ENST00000561630 ZBTB8BQ8NAP8 495 aaPredicted RBP17.47■□□□□ 0.39
CDR2-202ENST00000561630 SEPSECSQ9HD40 501 aaKnown RBP17.47■□□□□ 0.39
CDR2-202ENST00000561630 CFDP00746 253 aaPredicted RBP17.46■□□□□ 0.39
CDR2-202ENST00000561630 CA1P00915 261 aaPredicted RBP17.46■□□□□ 0.39
CDR2-202ENST00000561630 PAX9P55771 341 aa17.46■□□□□ 0.39
CDR2-202ENST00000561630 C1orf194Q5T5A4 169 aa17.46■□□□□ 0.39
CDR2-202ENST00000561630 TRPT1Q86TN4 253 aaKnown RBP17.46■□□□□ 0.39
CDR2-202ENST00000561630 GSKIPQ9P0R6 139 aa17.46■□□□□ 0.39
CDR2-202ENST00000561630 AKR1C1Q04828 323 aa17.45■□□□□ 0.38
CDR2-202ENST00000561630 PSMG4Q5JS54 123 aa17.45■□□□□ 0.38
CDR2-202ENST00000561630 RAB40CQ96S21 281 aa17.45■□□□□ 0.38
CDR2-202ENST00000561630 KNCNA6PVL3 124 aa17.44■□□□□ 0.38
CDR2-202ENST00000561630 PMS2P5A8MQ11 134 aa17.44■□□□□ 0.38
CDR2-202ENST00000561630 SCGB1D2O95969 90 aa17.44■□□□□ 0.38
CDR2-202ENST00000561630 ATF4P18848 351 aaPredicted RBP17.44■□□□□ 0.38
CDR2-202ENST00000561630 SNRPD3P62318 126 aaKnown RBP17.44■□□□□ 0.38
CDR2-202ENST00000561630 EWSR1Q01844 656 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDR2-202ENST00000561630 TMEM14EPQ6UXP3 125 aa17.44■□□□□ 0.38
CDR2-202ENST00000561630 TMEM144Q7Z5S9 345 aa17.44■□□□□ 0.38
CDR2-202ENST00000561630 ZNF431Q8TF32 576 aaPredicted RBP17.44■□□□□ 0.38
CDR2-202ENST00000561630 FBXL17Q9UF56 701 aa17.44■□□□□ 0.38
CDR2-202ENST00000561630 TBC1D24Q9ULP9 559 aa17.44■□□□□ 0.38
CDR2-202ENST00000561630 LCE6AA0A183 80 aa17.43■□□□□ 0.38
CDR2-202ENST00000561630 TAS2R30P59541 319 aa17.43■□□□□ 0.38
CDR2-202ENST00000561630 ACTL10Q5JWF8 245 aa17.43■□□□□ 0.38
CDR2-202ENST00000561630 RARRES2Q99969 163 aa17.43■□□□□ 0.38
CDR2-202ENST00000561630 SEC22CQ9BRL7 303 aa17.43■□□□□ 0.38
CDR2-202ENST00000561630 RCL1Q9Y2P8 373 aaKnown RBP17.43■□□□□ 0.38
CDR2-202ENST00000561630 FAM240BA0A1B0GVZ2 78 aa17.42■□□□□ 0.38
CDR2-202ENST00000561630 TSC22D2O75157 780 aa17.42■□□□□ 0.38
CDR2-202ENST00000561630 MBPP02686 304 aaPredicted RBP17.42■□□□□ 0.38
CDR2-202ENST00000561630 H2AFB2P0C5Z0 115 aa17.42■□□□□ 0.38
CDR2-202ENST00000561630 ASAH1Q13510 395 aa17.42■□□□□ 0.38
CDR2-202ENST00000561630 BPIFCQ8NFQ6 507 aa17.42■□□□□ 0.38
CDR2-202ENST00000561630 PPP1R14BQ96C90 147 aa17.42■□□□□ 0.38
CDR2-202ENST00000561630 SLC45A2Q9UMX9 530 aa17.42■□□□□ 0.38
CDR2-202ENST00000561630 CCSO14618 274 aa17.41■□□□□ 0.38
CDR2-202ENST00000561630 GIG44P09565 113 aaPredicted RBP17.41■□□□□ 0.38
CDR2-202ENST00000561630 SPP1P10451 314 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms