RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 UBALD1Q8TB05 177 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 STAG3L4Q8TBR4 150 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 DEDD2Q8WXF8 326 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 PPP3R2Q96LZ3 170 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 PRELID3AQ96N28 172 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 IMMP2LQ96T52 175 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 MRPL32Q9BYC8 188 aaKnown RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 C11orf1Q9H5F2 150 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 OTORQ9NRC9 128 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 CBLN4Q9NTU7 201 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 TP73-AS1Q9UF72 201 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 ITGB4P16144 1822 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 OVOS2A0A0J9YW53 1432 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 RTEL1-TNFRSF6BF6WH68 1400 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 CRB1P82279 1406 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 OVOS2Q6IE36 1432 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 KDM5CP41229 1560 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 DIP2CQ9Y2E4 1556 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SUPT6HQ7KZ85 1726 aaKnown RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 KMT2EQ8IZD2 1858 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 PZPP20742 1482 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 RPRD2Q5VT52 1461 aaKnown RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 PLEKHH2Q8IVE3 1493 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 NHSL1Q5SYE7 1610 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 TMEM2Q9UHN6 1383 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 IQGAP1P46940 1657 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 IGLV3-16A0A075B6K0 115 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 IGKV1D-43A0A0B4J1Z2 117 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 TRAV40A0A0B4J280 105 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 A0A1B0GW64 132 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 A8MWV9 139 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 GGTLC3B5MD39 225 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 H3BQ85 93 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 BUB1B-PAK6H3BSN5 160 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 H7BYZ3 331 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 J3QQQ9 107 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 M0R378 163 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 PSCAO43653 123 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 YPEL1O60688 119 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 NCR2O95944 276 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 SOD1P00441 154 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 HTR1AP08908 422 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 CXCL1P09341 107 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 AKAIN1P0CW23 69 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 GZMBP10144 247 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 CCL3P10147 92 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 TPT1P13693 172 aaKnown RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 HIST1H1BP16401 226 aaKnown RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 HOXB6P17509 224 aaKnown RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 FKBP2P26885 142 aaKnown RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 RPL22P35268 128 aaKnown RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 XCL1P47992 114 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 HINT1P49773 126 aaPredicted RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 RBP2P50120 134 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 AKR1D1P51857 326 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 ZNF816Q0VGE8 651 aaPredicted RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 TROQ12816 1431 aaPredicted RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 LGALS9BQ3B8N2 356 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 KRTAP24-1Q3LI83 254 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 LGALS9CQ6DKI2 356 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 C16orf47Q6ZP98 133 aaPredicted RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 GTF2H5Q6ZYL4 71 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 DEFB128Q7Z7B8 93 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 ZNF433Q8N7K0 673 aaPredicted RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 SPANXA2-OT1Q8N9U9 137 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 OR5A2Q8NGI9 324 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 TERB2Q8NHR7 220 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 RNASE6Q93091 150 aaKnown RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 MRPS24Q96EL2 167 aaKnown RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 LINC00467Q9BRT7 94 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 PSMG3Q9BT73 122 aaPredicted RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 SPANXDQ9BXN6 97 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 DUSP21Q9H596 190 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 LINC00574Q9H8X3 128 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 CCDC167Q9P0B6 97 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 TNFSF18Q9UNG2 199 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 KIAA1107Q9UPP5 1409 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 KIF14Q15058 1648 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 NKTRP30414 1462 aaKnown RBP1.36□□□□□ -2.19
RTF1-207ENST00000561076 BCL9LQ86UU0 1499 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 SCN10AQ9Y5Y9 1956 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 UNC79Q9P2D8 2635 aa1.36□□□□□ -2.19
RTF1-207ENST00000561076 CLTCQ00610 1675 aaKnown RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 CCNB3Q8WWL7 1395 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 PCNX3Q9H6A9 2034 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 CACNA1GO43497 2377 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 POLR1AO95602 1720 aaPredicted RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 TNS2Q63HR2 1409 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 A0A087WYN8 130 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 TRGV5A0A0B4J1U4 118 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 TRBV7-6A0A0J9YX20 115 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 CYSRT1A8MQ03 144 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 CDC42EP2O14613 210 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 NPFFO15130 113 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 ZNF861PO60384 105 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 PROSCO94903 275 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 RBP4P02753 201 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 P0DMU3 169 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 FAM231AP0DMU4 169 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 FAM231CP0DMU5 169 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms