RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 TRAV10A0A0B4J240 114 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 BUB3O43684 328 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 PSG1P11464 419 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 CCR6P51684 374 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 SMCO1Q147U7 214 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 LGI3Q8N145 548 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 OR51G1Q8NGK1 321 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 DYNC2LI1Q8TCX1 351 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 DTD1Q8TEA8 209 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 RAB2BQ8WUD1 216 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 SCGB3A2Q96PL1 93 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 C1QTNF4Q9BXJ3 329 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 RBKSQ9H477 322 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 SEPSECSQ9HD40 501 aaKnown RBP10.1□□□□□ -0.79
USP8-215ENST00000560982 MCUBQ9NWR8 336 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 HSPB7Q9UBY9 170 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 U3KQ87 197 aa10.1□□□□□ -0.79
USP8-215ENST00000560982 A0A0B4J2A0 478 aa10.09□□□□□ -0.79
USP8-215ENST00000560982 AKR1C4P17516 323 aa10.09□□□□□ -0.79
USP8-215ENST00000560982 NUTF2P61970 127 aaKnown RBP10.09□□□□□ -0.79
USP8-215ENST00000560982 SUPT4H1P63272 117 aaKnown RBP10.09□□□□□ -0.79
USP8-215ENST00000560982 KLF9Q13886 244 aaPredicted RBP10.09□□□□□ -0.79
USP8-215ENST00000560982 LYZL2Q7Z4W2 148 aa10.09□□□□□ -0.79
USP8-215ENST00000560982 RNF125Q96EQ8 232 aa10.09□□□□□ -0.79
USP8-215ENST00000560982 PBDC1Q9BVG4 233 aa10.09□□□□□ -0.79
USP8-215ENST00000560982 RSL24D1Q9UHA3 163 aaKnown RBP10.09□□□□□ -0.79
USP8-215ENST00000560982 SHPKQ9UHJ6 478 aa10.09□□□□□ -0.79
USP8-215ENST00000560982 IGHV4-4A0A075B6R2 117 aa10.08□□□□□ -0.8
USP8-215ENST00000560982 H3BMM0 161 aa10.08□□□□□ -0.8
USP8-215ENST00000560982 ANXA3P12429 323 aa10.08□□□□□ -0.8
USP8-215ENST00000560982 NUP62P37198 522 aaPredicted RBP10.08□□□□□ -0.8
USP8-215ENST00000560982 XCL2Q9UBD3 114 aa10.08□□□□□ -0.8
USP8-215ENST00000560982 CELA1Q9UNI1 258 aa10.08□□□□□ -0.8
USP8-215ENST00000560982 ZFP92A6NM28 416 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 TMBIM6P55061 237 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 SRPXP78539 464 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 OR8G2PQ6IF36 304 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 ZNF767PQ75MW2 155 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 OR1S1Q8NH92 325 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 BCL7BQ9BQE9 202 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 PFDN2Q9UHV9 154 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
USP8-215ENST00000560982 HECTD4Q9Y4D8 3996 aa10.06□□□□□ -0.8
USP8-215ENST00000560982 FABP12A6NFH5 140 aa10.06□□□□□ -0.8
USP8-215ENST00000560982 GPX4P36969 197 aaPredicted RBP10.06□□□□□ -0.8
USP8-215ENST00000560982 NKX2-1P43699 371 aaPredicted RBP10.06□□□□□ -0.8
USP8-215ENST00000560982 ATP5IP56385 69 aaPredicted RBP10.06□□□□□ -0.8
USP8-215ENST00000560982 ZNF90Q03938 601 aa10.06□□□□□ -0.8
USP8-215ENST00000560982 GAMTQ14353 236 aa10.06□□□□□ -0.8
USP8-215ENST00000560982 C12orf74Q32Q52 190 aa10.06□□□□□ -0.8
USP8-215ENST00000560982 RNF126Q9BV68 326 aa10.06□□□□□ -0.8
USP8-215ENST00000560982 IGKV1D-37A0A075B6S9 117 aa10.05□□□□□ -0.8
USP8-215ENST00000560982 DEFB131BA0A096LNP1 70 aa10.05□□□□□ -0.8
USP8-215ENST00000560982 TNFSF8P32971 234 aa10.05□□□□□ -0.8
USP8-215ENST00000560982 LYZP61626 148 aa10.05□□□□□ -0.8
USP8-215ENST00000560982 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
USP8-215ENST00000560982 LINC00052Q96N35 136 aa10.05□□□□□ -0.8
USP8-215ENST00000560982 SOSTQ9BQB4 213 aa10.05□□□□□ -0.8
USP8-215ENST00000560982 SLIRPQ9GZT3 109 aaKnown RBP10.05□□□□□ -0.8
USP8-215ENST00000560982 DNAH6Q9C0G6 4158 aa10.05□□□□□ -0.8
USP8-215ENST00000560982 PIGBOS1A0A0B4J2F0 54 aa10.04□□□□□ -0.8
USP8-215ENST00000560982 NOL3O60936 208 aaKnown RBP10.04□□□□□ -0.8
USP8-215ENST00000560982 IGKV3-20P01619 116 aa10.04□□□□□ -0.8
USP8-215ENST00000560982 AMBPP02760 352 aa10.04□□□□□ -0.8
USP8-215ENST00000560982 FABP1P07148 127 aa10.04□□□□□ -0.8
USP8-215ENST00000560982 FAUP35544 74 aaKnown RBP10.04□□□□□ -0.8
USP8-215ENST00000560982 ID1P41134 155 aa10.04□□□□□ -0.8
USP8-215ENST00000560982 DEFB1P60022 68 aa10.04□□□□□ -0.8
USP8-215ENST00000560982 ZNF705AQ6ZN79 300 aaPredicted RBP10.04□□□□□ -0.8
USP8-215ENST00000560982 TMED4Q7Z7H5 227 aa10.04□□□□□ -0.8
USP8-215ENST00000560982 WDR12Q9GZL7 423 aaKnown RBP10.04□□□□□ -0.8
USP8-215ENST00000560982 DUXBA0A1W2PPF3 345 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 SNRPGP15A8MWD9 76 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 H3BMQ9 156 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 PITX3O75364 302 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 IAPPP10997 89 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 PSMB3P49720 205 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 FXYD7P58549 80 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 RAB11AP62491 216 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 OR2F1Q13607 317 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 C1orf194Q5T5A4 169 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 FOXI2Q6ZQN5 318 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 MCFD2Q8NI22 146 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 COQ8AQ8NI60 647 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 PPP1R14BQ96C90 147 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 NEU1Q99519 415 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 SAV1Q9H4B6 383 aaPredicted RBP10.03□□□□□ -0.8
USP8-215ENST00000560982 PAIP2BQ9ULR5 123 aaKnown RBP10.03□□□□□ -0.8
USP8-215ENST00000560982 HERC2O95714 4834 aa10.03□□□□□ -0.8
USP8-215ENST00000560982 IGHV3OR16-12A0A075B7B8 117 aa10.02□□□□□ -0.81
USP8-215ENST00000560982 ZNF705FA8MVS1 300 aaPredicted RBP10.02□□□□□ -0.81
USP8-215ENST00000560982 SOCS3O14543 225 aa10.02□□□□□ -0.81
USP8-215ENST00000560982 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
USP8-215ENST00000560982 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
USP8-215ENST00000560982 VAMP1P23763 118 aa10.02□□□□□ -0.81
USP8-215ENST00000560982 TMEM128Q5BJH2 165 aa10.02□□□□□ -0.81
USP8-215ENST00000560982 GSG1LQ6UXU4 331 aa10.02□□□□□ -0.81
USP8-215ENST00000560982 OR8I2Q8N0Y5 310 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms