RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 OR8G2PQ6IF36 304 aa13.01□□□□□ -0.33
TPM1-226ENST00000560959 EBLN2Q6P2I7 272 aa13.01□□□□□ -0.33
TPM1-226ENST00000560959 NOXA1Q86UR1 476 aa13.01□□□□□ -0.33
TPM1-226ENST00000560959 LHFPL1Q86WI0 220 aa13.01□□□□□ -0.33
TPM1-226ENST00000560959 NPIPB3Q92617 1050 aa13.01□□□□□ -0.33
TPM1-226ENST00000560959 WDR12Q9GZL7 423 aaKnown RBP13.01□□□□□ -0.33
TPM1-226ENST00000560959 A0A0G2JRQ6 117 aa13□□□□□ -0.33
TPM1-226ENST00000560959 SOCS3O14543 225 aa13□□□□□ -0.33
TPM1-226ENST00000560959 NXPH3O95157 252 aa13□□□□□ -0.33
TPM1-226ENST00000560959 PSG1P11464 419 aa13□□□□□ -0.33
TPM1-226ENST00000560959 UCP1P25874 307 aa13□□□□□ -0.33
TPM1-226ENST00000560959 RORCP51449 518 aa13□□□□□ -0.33
TPM1-226ENST00000560959 DEFB1P60022 68 aa13□□□□□ -0.33
TPM1-226ENST00000560959 TRIM16LQ309B1 348 aa13□□□□□ -0.33
TPM1-226ENST00000560959 SAMD13Q5VXD3 122 aa13□□□□□ -0.33
TPM1-226ENST00000560959 SLC24A4Q8NFF2 622 aa13□□□□□ -0.33
TPM1-226ENST00000560959 COQ8AQ8NI60 647 aa13□□□□□ -0.33
TPM1-226ENST00000560959 MAGT1Q9H0U3 335 aa13□□□□□ -0.33
TPM1-226ENST00000560959 HEYLQ9NQ87 328 aaPredicted RBP13□□□□□ -0.33
TPM1-226ENST00000560959 SMIM31A0A1B0GVY4 71 aa12.99□□□□□ -0.33
TPM1-226ENST00000560959 ISLRO14498 428 aa12.99□□□□□ -0.33
TPM1-226ENST00000560959 BTF3P20290 206 aaKnown RBP12.99□□□□□ -0.33
TPM1-226ENST00000560959 FAM78BQ5VT40 261 aa12.99□□□□□ -0.33
TPM1-226ENST00000560959 OR51G1Q8NGK1 321 aa12.99□□□□□ -0.33
TPM1-226ENST00000560959 RNF125Q96EQ8 232 aa12.99□□□□□ -0.33
TPM1-226ENST00000560959 CACFD1Q9UGQ2 172 aa12.99□□□□□ -0.33
TPM1-226ENST00000560959 A0A0J9YX75 114 aa12.98□□□□□ -0.33
TPM1-226ENST00000560959 A8MTW9 85 aa12.98□□□□□ -0.33
TPM1-226ENST00000560959 PI3P19957 117 aa12.98□□□□□ -0.33
TPM1-226ENST00000560959 RPS19P39019 145 aaKnown RBP12.98□□□□□ -0.33
TPM1-226ENST00000560959 B2MP61769 119 aa12.98□□□□□ -0.33
TPM1-226ENST00000560959 ARRDC1Q8N5I2 433 aa12.98□□□□□ -0.33
TPM1-226ENST00000560959 IGF2BP2-AS1Q96M15 143 aa12.98□□□□□ -0.33
TPM1-226ENST00000560959 LINC00588Q9Y4M8 146 aa12.98□□□□□ -0.33
TPM1-226ENST00000560959 EPM2AB3EWF7 344 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 ANKRD65E5RJM6 399 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 M0QYG6 137 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 CDS2O95674 445 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 TSPOP30536 169 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 SUPT4H1P63272 117 aaKnown RBP12.97□□□□□ -0.33
TPM1-226ENST00000560959 SP6Q3SY56 376 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 CCDC71LQ8N9Z2 235 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 RNASE11Q8TAA1 199 aaKnown RBP12.97□□□□□ -0.33
TPM1-226ENST00000560959 ZFAND1Q8TCF1 268 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 TMEM170AQ8WVE7 144 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 COPZ2Q9P299 210 aa12.97□□□□□ -0.33
TPM1-226ENST00000560959 NUDT3O95989 172 aa12.96□□□□□ -0.33
TPM1-226ENST00000560959 APOA1P02647 267 aa12.96□□□□□ -0.33
TPM1-226ENST00000560959 ACY3Q96HD9 319 aa12.96□□□□□ -0.33
TPM1-226ENST00000560959 ABHD1Q96SE0 405 aa12.96□□□□□ -0.33
TPM1-226ENST00000560959 TMEM208Q9BTX3 173 aa12.96□□□□□ -0.33
TPM1-226ENST00000560959 Q9H8V8 135 aa12.96□□□□□ -0.33
TPM1-226ENST00000560959 RPRMQ9NS64 109 aa12.96□□□□□ -0.33
TPM1-226ENST00000560959 F5H768 121 aa12.95□□□□□ -0.34
TPM1-226ENST00000560959 TTC32Q5I0X7 151 aa12.95□□□□□ -0.34
TPM1-226ENST00000560959 AMTNQ6UX39 209 aa12.95□□□□□ -0.34
TPM1-226ENST00000560959 TMEM222Q9H0R3 208 aa12.95□□□□□ -0.34
TPM1-226ENST00000560959 DOK5Q9P104 306 aa12.95□□□□□ -0.34
TPM1-226ENST00000560959 CBY3A6NI87 242 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 CEBPZOSA8MTT3 80 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 F6UB75 175 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 ATP5G1P05496 136 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 TBPP20226 339 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 ATP5G3P48201 142 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 MEOX2P50222 304 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 KLF9Q13886 244 aaPredicted RBP12.94□□□□□ -0.34
TPM1-226ENST00000560959 RNASE10Q5GAN6 216 aaKnown RBP12.94□□□□□ -0.34
TPM1-226ENST00000560959 NMSQ5H8A3 153 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 SNX29P2Q8IUI4 249 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 TERB2Q8NHR7 220 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 GPR146Q96CH1 333 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 PBDC1Q9BVG4 233 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 U3KQ87 197 aa12.94□□□□□ -0.34
TPM1-226ENST00000560959 DMBT1Q9UGM3 2413 aaPredicted RBP12.94□□□□□ -0.34
TPM1-226ENST00000560959 A0A1W2PPQ1 181 aa12.93□□□□□ -0.34
TPM1-226ENST00000560959 DEFB130BP0DP73 79 aa12.93□□□□□ -0.34
TPM1-226ENST00000560959 DEFB130AP0DP74 79 aa12.93□□□□□ -0.34
TPM1-226ENST00000560959 SSX7Q7RTT5 188 aa12.93□□□□□ -0.34
TPM1-226ENST00000560959 RBPMSQ93062 196 aaKnown RBP12.93□□□□□ -0.34
TPM1-226ENST00000560959 TGFBR1P36897 503 aa12.92□□□□□ -0.34
TPM1-226ENST00000560959 ATP5IP56385 69 aaPredicted RBP12.92□□□□□ -0.34
TPM1-226ENST00000560959 CLINT1Q14677 625 aa12.92□□□□□ -0.34
TPM1-226ENST00000560959 GLYATL2Q8WU03 294 aa12.92□□□□□ -0.34
TPM1-226ENST00000560959 Q9H3A6 140 aa12.92□□□□□ -0.34
TPM1-226ENST00000560959 CACNG5Q9UF02 275 aa12.92□□□□□ -0.34
TPM1-226ENST00000560959 TEX13DA0A0J9YY54 714 aaPredicted RBP12.91□□□□□ -0.34
TPM1-226ENST00000560959 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
TPM1-226ENST00000560959 SNRPGP15A8MWD9 76 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 FABP1P07148 127 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 INAFM2P0DMQ5 153 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 NEDD8Q15843 81 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 OR8I2Q8N0Y5 310 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 OR4C16Q8NGL9 310 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 RNF141Q8WVD5 230 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 Q9H521 79 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
TPM1-226ENST00000560959 PLAC8L1A1L4L8 177 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 ZFP92A6NM28 416 aa12.9□□□□□ -0.34
TPM1-226ENST00000560959 CRXO43186 299 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms