RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 MAP1LC3B2A6NCE7 125 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 INAFM1C9JVW0 142 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 IGHV3-23P01764 117 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 HBE1P02100 147 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 STAG3L2P0CL84 134 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 STAG3L3P0CL85 134 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 PSG1P11464 419 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 RPL15P61313 204 aaKnown RBP8.75□□□□□ -1.01
SNX1-212ENST00000560861 ATP5G2Q06055 141 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 C10orf99Q6UWK7 81 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 LCN15Q6UWW0 184 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 COMMD1Q8N668 190 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 GATAD1Q8WUU5 269 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 SFT2D1Q8WV19 159 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 CHRDL1Q9BU40 450 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 C19orf24Q9BVV8 132 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 MAP1LC3BQ9GZQ8 125 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 SEPSECSQ9HD40 501 aaKnown RBP8.75□□□□□ -1.01
SNX1-212ENST00000560861 ZNF355PQ9NSJ1 428 aa8.75□□□□□ -1.01
SNX1-212ENST00000560861 TRBV7-1A0A0A6YYK4 115 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 FAM181BA6NEQ2 426 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 GNG7O60262 68 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 OR2C1O95371 312 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 RAB9AP51151 201 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 TPPP2P59282 170 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 RHOBP62745 196 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 Q56UQ5 140 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 Q71RC1 249 aaPredicted RBP8.74□□□□□ -1.01
SNX1-212ENST00000560861 MIR17HGQ75NE6 70 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 ZNF418Q8TF45 676 aaPredicted RBP8.74□□□□□ -1.01
SNX1-212ENST00000560861 EEF1AKMT3Q96AZ1 226 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 USMG5Q96IX5 58 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 FAM167A-AS1Q96KT0 104 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 MRPL32Q9BYC8 188 aaKnown RBP8.74□□□□□ -1.01
SNX1-212ENST00000560861 MRPL27Q9P0M9 148 aaKnown RBP8.74□□□□□ -1.01
SNX1-212ENST00000560861 FUT9Q9Y231 359 aa8.74□□□□□ -1.01
SNX1-212ENST00000560861 CUBNO60494 3623 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.73□□□□□ -1.01
SNX1-212ENST00000560861 CD5P06127 495 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 FABP1P07148 127 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 ELANEP08246 267 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 RD3LP0DJH9 198 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 PF4V1P10720 104 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 GPR183P32249 361 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 FGF8P55075 233 aaPredicted RBP8.73□□□□□ -1.01
SNX1-212ENST00000560861 SRSF3P84103 164 aaKnown RBP8.73□□□□□ -1.01
SNX1-212ENST00000560861 FOXE3Q13461 319 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 KRTAP21-3Q3LHN1 58 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 MORN5Q5VZ52 161 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 ZNF343Q6P1L6 599 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 LCNL1Q6ZST4 164 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 ZNF329Q86UD4 541 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 ZNF491Q8N8L2 437 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 OR51G1Q8NGK1 321 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 OR1L4Q8NGR5 311 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 ZNF503Q96F45 646 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 FAM210AQ96ND0 272 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 RNF2Q99496 336 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 C16orf95Q9H693 158 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 DNAJC4Q9NNZ3 241 aa8.73□□□□□ -1.01
SNX1-212ENST00000560861 GAR1Q9NY12 217 aaKnown RBP8.73□□□□□ -1.01
SNX1-212ENST00000560861 ELOA3CA0A087WX78 387 aaPredicted RBP8.72□□□□□ -1.01
SNX1-212ENST00000560861 A0A1B0GV50 99 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 OR2T8A6NH00 312 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
SNX1-212ENST00000560861 TGOLN2O43493 480 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 COX7A2P2O60397 106 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 CRLF1O75462 422 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 CLEC3BP05452 202 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 UQCC3Q6UW78 93 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 CLEC19AQ6UXS0 136 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 SUN5Q8TC36 379 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 PFDN5Q99471 154 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 TMPRSS5Q9H3S3 457 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 ZFAND3Q9H8U3 227 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 DOK5Q9P104 306 aa8.72□□□□□ -1.01
SNX1-212ENST00000560861 A0A0G2JLM5 398 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 LOC102723971A0A1B0GUV8 181 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 A0A1W2PPV4 95 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 C9JQL5 133 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 HYPMO75409 117 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 NDUFA7O95182 113 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 TRBV12-3P01733 135 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 ARL14EPLP0DKL9 152 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 USF2Q15853 346 aaPredicted RBP8.71□□□□□ -1.02
SNX1-212ENST00000560861 GUK1Q16774 197 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 ZNF506Q5JVG8 444 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 C10orf113Q5VZT2 155 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 TEX38Q6PEX7 206 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 ZNF600Q6ZNG1 722 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 RNF125Q96EQ8 232 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 UHRF2Q96PU4 802 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 SLC25A2Q9BXI2 301 aa8.71□□□□□ -1.02
SNX1-212ENST00000560861 TRAV5A0A0B4J249 113 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 H3BRN7 92 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 NUPL2O15504 423 aaKnown RBP8.7□□□□□ -1.02
SNX1-212ENST00000560861 CXorf1O96002 111 aa8.7□□□□□ -1.02
SNX1-212ENST00000560861 RPLP1P05386 114 aaKnown RBP8.7□□□□□ -1.02
SNX1-212ENST00000560861 C8orf88P0DMB2 117 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms