RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 NUPR1O60356 82 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 KRTAP2-3P0C7H8 128 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 AP3S2P59780 193 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 CIRBPQ14011 172 aaKnown RBP0.16□□□□□ -2.38
PSMA4-221ENST00000560842 Q8IYB0 196 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 GDPD1Q8N9F7 314 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 OR2T10Q8NGZ9 312 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 CT55Q8WUE5 264 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 KRTAP2-4Q9BYR9 128 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 KRTAP2-1Q9BYU5 128 aa0.16□□□□□ -2.38
PSMA4-221ENST00000560842 NCOA1Q15788 1441 aa0.15□□□□□ -2.39
PSMA4-221ENST00000560842 A0A087WUJ7 227 aa0.15□□□□□ -2.39
PSMA4-221ENST00000560842 IGHV1-58A0A0C4DH39 117 aa0.15□□□□□ -2.39
PSMA4-221ENST00000560842 hADV38S2A0JD32 116 aa0.15□□□□□ -2.39
PSMA4-221ENST00000560842 DNAL4O96015 105 aa0.15□□□□□ -2.39
PSMA4-221ENST00000560842 RNASE4P34096 147 aaKnown RBP0.15□□□□□ -2.39
PSMA4-221ENST00000560842 LINC00575Q6W349 94 aa0.15□□□□□ -2.39
PSMA4-221ENST00000560842 GRINAQ7Z429 371 aa0.15□□□□□ -2.39
PSMA4-221ENST00000560842 PARD6GQ9BYG4 376 aaPredicted RBP0.15□□□□□ -2.39
PSMA4-221ENST00000560842 C6orf62Q9GZU0 229 aaPredicted RBP0.15□□□□□ -2.39
PSMA4-221ENST00000560842 TMEM14CQ9P0S9 112 aa0.15□□□□□ -2.39
PSMA4-221ENST00000560842 UTP11Q9Y3A2 253 aaKnown RBP0.15□□□□□ -2.39
PSMA4-221ENST00000560842 PIK3C2GO75747 1445 aa0.14□□□□□ -2.39
PSMA4-221ENST00000560842 A0A0D9SG42 100 aa0.14□□□□□ -2.39
PSMA4-221ENST00000560842 PPIBP23284 216 aaKnown RBP0.14□□□□□ -2.39
PSMA4-221ENST00000560842 ANP32AP39687 249 aaKnown RBP0.14□□□□□ -2.39
PSMA4-221ENST00000560842 KRTAP26-1Q6PEX3 210 aa0.14□□□□□ -2.39
PSMA4-221ENST00000560842 SLAMF6Q96DU3 332 aa0.14□□□□□ -2.39
PSMA4-221ENST00000560842 CMSS1Q9BQ75 279 aaKnown RBP0.14□□□□□ -2.39
PSMA4-221ENST00000560842 KDM6AO15550 1401 aaPredicted RBP0.13□□□□□ -2.39
PSMA4-221ENST00000560842 TLCD2A6NGC4 264 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 J3QRK9 145 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 HOXA6P31267 233 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 DYNLT1P63172 113 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 Q6Q795 121 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 TMEM254Q8TBM7 123 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 LINC00052Q96N35 136 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 TLNRD1Q9H1K6 362 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 NAV2Q8IVL1 2488 aa0.13□□□□□ -2.39
PSMA4-221ENST00000560842 MED12Q93074 2177 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 OBSL1O75147 1896 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 TCRBV4S1A1TA0A5B7 111 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 K7EIL1 84 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 C8GP07360 202 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 OMPP47874 163 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 ZNF833PQ6ZTB9 187 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 ST6GALNAC3Q8NDV1 305 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 GPER1Q99527 375 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 LINC00467Q9BRT7 94 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 PRADC1Q9BSG0 188 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 TVP23BQ9NYZ1 205 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 PLAC8Q9NZF1 115 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 ORMDL1Q9P0S3 153 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 ZNF462Q96JM2 2506 aa0.12□□□□□ -2.39
PSMA4-221ENST00000560842 CITO14578 2027 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 SIP14410 1827 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 RTL1A6NKG5 1358 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 hCG_1818297A0A087WSY0 165 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 A8MT66 165 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 KLF7O75840 302 aaPredicted RBP0.11□□□□□ -2.39
PSMA4-221ENST00000560842 GADD45GO95257 159 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 SERPINE1P05121 402 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 SRIP30626 198 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 SLC30A7Q8NEW0 376 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 C14orf105Q9NVL8 296 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 IDI2-AS1Q9NZ38 188 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 CACNA1EQ15878 2313 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 MYH7BA7E2Y1 1941 aa0.11□□□□□ -2.39
PSMA4-221ENST00000560842 CECR2Q9BXF3 1484 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 SNRNP200O75643 2136 aaKnown RBP0.1□□□□□ -2.39
PSMA4-221ENST00000560842 SMIM23A6NLE4 172 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 C1orf196B1AJZ1 125 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 CYB5BO43169 146 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 IGLV3-1P01715 115 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 ROMO1P60602 79 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 RANP62826 216 aaKnown RBP0.1□□□□□ -2.39
PSMA4-221ENST00000560842 HIST1H3AP68431 136 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 H3F3AP84243 136 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 EDDM3AQ14507 147 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 SPINK9Q5DT21 86 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 OR11H6Q8NGC7 330 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 TMEM126AQ9H061 195 aa0.1□□□□□ -2.39
PSMA4-221ENST00000560842 RNASE7Q9H1E1 156 aaKnown RBP0.1□□□□□ -2.39
PSMA4-221ENST00000560842 IGLV3-32A0A0A0MS00 114 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 OR2T8A6NH00 312 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 PTRHD1Q6GMV3 140 aaKnown RBP0.09□□□□□ -2.4
PSMA4-221ENST00000560842 HAGHLQ6PII5 290 aaPredicted RBP0.09□□□□□ -2.4
PSMA4-221ENST00000560842 OR52L1Q8NGH7 329 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 SLC25A40Q8TBP6 338 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 FAM172AQ8WUF8 416 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 TP53RKQ96S44 253 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 LYSMD1Q96S90 227 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 TAS2R7Q9NYW3 318 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 FBXO5Q9UKT4 447 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 FAT4Q6V0I7 4981 aa0.09□□□□□ -2.4
PSMA4-221ENST00000560842 KIF1BO60333 1816 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 ADCY9O60503 1353 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 SMIM9A6NGZ8 99 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 TIMM17BO60830 172 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 SMIM17P0DL12 118 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms