RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 IGHV3-35A0A0C4DH35 117 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 A0A1B0GU03 582 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 NPIPB5A8MRT5 1133 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 KRBOX1C9JBD0 128 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 TSPAN4O14817 238 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 IGLV2-14P01704 120 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 IL6RP08887 468 aaPredicted RBP7.24□□□□□ -1.25
TPM1-225ENST00000560679 DUTP33316 252 aaKnown RBP7.24□□□□□ -1.25
TPM1-225ENST00000560679 VAMP2P63027 116 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 KLK9Q2XQG4 91 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 ZNF645Q8N7E2 425 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 UBAC2Q8NBM4 344 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 OR5B3Q8NH48 314 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 CD300LFQ8TDQ1 290 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 RARRES2Q99969 163 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 SMIM3Q9BZL3 60 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 ARV1Q9H2C2 271 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 MRPL27Q9P0M9 148 aaKnown RBP7.24□□□□□ -1.25
TPM1-225ENST00000560679 KLK9Q9UKQ9 250 aa7.24□□□□□ -1.25
TPM1-225ENST00000560679 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 A0A0G2JRQ6 117 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 RAB19A4D1S5 217 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 TEX46H3BTG2 121 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 WRBO00258 174 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 SSSCA1O60232 199 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 PITX3O75364 302 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 IGKV1-39P01597 117 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 IGKV1D-39P04432 117 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 AREGP15514 252 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 POLR2GP62487 172 aaKnown RBP eCLIP7.23□□□□□ -1.25
TPM1-225ENST00000560679 ID3Q02535 119 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 APRG1Q8IVJ8 170 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 MMD2Q8IY49 270 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 OR1S2Q8NGQ3 325 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 OR11H2Q8NH07 326 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 RNASE11Q8TAA1 199 aaKnown RBP7.23□□□□□ -1.25
TPM1-225ENST00000560679 TMEM190Q8WZ59 177 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 EEF1AKMT3Q96AZ1 226 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 GPR146Q96CH1 333 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 SAT2Q96F10 170 aaPredicted RBP7.23□□□□□ -1.25
TPM1-225ENST00000560679 BSCL2Q96G97 398 aaPredicted RBP7.23□□□□□ -1.25
TPM1-225ENST00000560679 LINC00052Q96N35 136 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 SLC25A31Q9H0C2 315 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 WFDC1Q9HC57 220 aa7.23□□□□□ -1.25
TPM1-225ENST00000560679 FAM212BQ9NTI7 297 aaPredicted RBP7.23□□□□□ -1.25
TPM1-225ENST00000560679 LYRM2Q9NU23 88 aaPredicted RBP7.23□□□□□ -1.25
TPM1-225ENST00000560679 IGSF23A1L1A6 192 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 IGKV1-5P01602 117 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 CRYGCP07315 174 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 GPR183P32249 361 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 SULT1A2P50226 295 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 AKR1C2P52895 323 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 ELLP55199 621 aaPredicted RBP7.22□□□□□ -1.25
TPM1-225ENST00000560679 BLOC1S1P78537 153 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 CATR1Q13166 79 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 EIF4EBP1Q13541 118 aaPredicted RBP7.22□□□□□ -1.25
TPM1-225ENST00000560679 UQCC3Q6UW78 93 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 VKORC1L1Q8N0U8 176 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 Q8NAQ8 132 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 OSR1Q8TAX0 266 aaPredicted RBP7.22□□□□□ -1.25
TPM1-225ENST00000560679 SMIM8Q96KF7 97 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 GINS3Q9BRX5 216 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 MAGT1Q9H0U3 335 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 CSTL1Q9H114 145 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 UFC1Q9Y3C8 167 aa7.22□□□□□ -1.25
TPM1-225ENST00000560679 IGLV11-55A0A075B6I3 123 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 IGHV4-4A0A075B6R2 117 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 FAM24AA6NFZ4 105 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 CGB1A6NKQ9 187 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 ZNF705EA8MWA4 302 aaPredicted RBP7.21□□□□□ -1.26
TPM1-225ENST00000560679 C11orf94C9JXX5 98 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 MED6O75586 246 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 ACTL6BO94805 426 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 ATG12O94817 140 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 REG1AP05451 166 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 CLEC3BP05452 202 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 SEC11BP0C7V7 166 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 LPAR6P43657 344 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 RPL27AP46776 148 aaKnown RBP7.21□□□□□ -1.26
TPM1-225ENST00000560679 CAV2P51636 162 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 BAXQ07812 192 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 ZNF66Q6ZN08 573 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 Q6ZTC4 211 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 TMEM252Q8N6L7 170 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 ZNF502Q8TBZ5 544 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 TCTEX1D2Q8WW35 142 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 RAB40CQ96S21 281 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 CACNG5Q9UF02 275 aa7.21□□□□□ -1.26
TPM1-225ENST00000560679 TRBV7-1A0A0A6YYK4 115 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 OR4C46A6NHA9 309 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 FAM90A26D6RGX4 464 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 M0R2N4 97 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 TMEM50AO95807 157 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 P0C879 139 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 MYOD1P15172 320 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 RPL30P62888 115 aaKnown RBP7.2□□□□□ -1.26
TPM1-225ENST00000560679 NHLH2Q02577 135 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 PXDC1Q5TGL8 231 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 BPIFCQ8NFQ6 507 aa7.2□□□□□ -1.26
TPM1-225ENST00000560679 ADTRPQ96IZ2 230 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms