RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TRGV10A0A0A0MS01 117 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 UBE2L5PA0A1B0GUS4 154 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 A0A1B0GW64 132 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF729A6NN14 1252 aaPredicted RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 CEBPZOSA8MTT3 80 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 ATP6V0E1O15342 81 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 OR2J3O76001 311 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 HPRT1P00492 218 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 CA1P00915 261 aaPredicted RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 IGHG4P01861 327 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 SRP19P09132 144 aaKnown RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 OR13C7P0DN81 318 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 IGHV4-38-2P0DP08 117 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 MDKP21741 143 aaPredicted RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 RPL13AP40429 203 aaKnown RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 AKR1C3P42330 323 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 RAB5CP51148 216 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 DLX1P56177 255 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 SLC38A11Q08AI6 406 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF266Q14584 549 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 FBXL19-AS1Q494R0 122 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 OR8G2PQ6IF36 304 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 SLC25A48Q6ZT89 311 aaKnown RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 Q6ZVQ6 151 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 STX12Q86Y82 276 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 LYG1Q8N1E2 194 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 ABHD12Q8N2K0 398 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 C11orf42Q8N5U0 333 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 TCTEX1D1Q8N7M0 179 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 Q8N7P7 452 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 DTD1Q8TEA8 209 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 PARD6GQ9BYG4 376 aaPredicted RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 WDR61Q9GZS3 305 aaKnown RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 RAB1BQ9H0U4 201 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 NRN1Q9NPD7 142 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 RPUSD1Q9UJJ7 312 aaKnown RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 NOTCH3Q9UM47 2321 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 INTS1Q8N201 2190 aaKnown RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 STAB1Q9NY15 2570 aa3.42□□□□□ -1.86
TMOD3-207ENST00000560549 FBN1P35555 2871 aaKnown RBP3.42□□□□□ -1.86
TMOD3-207ENST00000560549 TRAV38-1A0A0B4J264 116 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 hADV38S2A0JD32 116 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 RBFOX3A6NFN3 312 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 UMAD1C9J7I0 102 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 RBFOX2O43251 390 aaKnown RBP eCLIP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 LY6HO94772 140 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 IFNA5P01569 189 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 IGKV1-16P04430 117 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 ARG1P05089 322 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 OR8U8P0C7N1 319 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 CFC1BP0CG36 223 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 CFC1P0CG37 223 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 RNF224P0DH78 156 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 CHRNB4P30926 498 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 FGF8P55075 233 aaPredicted RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 SPCS3P61009 180 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 RAB2AP61019 212 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 GNB2P62879 340 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 RPL31P62899 125 aaKnown RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 MEF2CQ06413 473 aaPredicted RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 PEA15Q15121 130 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 AKR1C8PQ5T2L2 129 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 LCN15Q6UWW0 184 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF833PQ6ZTB9 187 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 Q71RC1 249 aaPredicted RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 SVBPQ8N300 66 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 STPG4Q8N801 248 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 C8orf31Q8N9H6 132 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 OR4F17Q8NGA8 305 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 OR4F5Q8NH21 305 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 CLDND2Q8NHS1 167 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 SCGB1C1Q8TD33 95 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 RXFP4Q8TDU9 374 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 SFT2D1Q8WV19 159 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 ITLN2Q8WWU7 325 aaPredicted RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 MBD3L1Q8WWY6 194 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 TAF15Q92804 592 aaKnown RBP eCLIP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 GNPNAT1Q96EK6 184 aaPredicted RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 OR4F4Q96R69 305 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 MCRIP2Q9BUT9 160 aaKnown RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 MRPL20Q9BYC9 149 aaKnown RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 EIF5A2Q9GZV4 153 aaKnown RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 DYNLRB1Q9NP97 96 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 TCF19Q9Y242 345 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 LINC00312Q9Y6C7 94 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 TRAV1-1A0A0B4J248 108 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 PIGBOS1A0A0B4J2F0 54 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 IGHV1-69-2A0A0G2JMI3 117 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 A0A1W2PPR1 153 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 COLCA2A8K830 154 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 G3V4G9 280 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 UPK2O00526 184 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 HMGB3O15347 200 aaKnown RBP3.41□□□□□ -1.86
TMOD3-207ENST00000560549 NDUFB3O43676 98 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 YIF1AO95070 293 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 IFNA17P01571 189 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 DEFA4P12838 97 aa3.41□□□□□ -1.86
TMOD3-207ENST00000560549 PAX1P15863 534 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms