RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ELLP55199 621 aaPredicted RBP10.7□□□□□ -0.7
PKNOX1-209ENST00000560448 SYNJ2BPP57105 145 aa10.7□□□□□ -0.7
PKNOX1-209ENST00000560448 TOR2AQ5JU69 321 aa10.7□□□□□ -0.7
PKNOX1-209ENST00000560448 SPANXN5Q5MJ07 72 aa10.7□□□□□ -0.7
PKNOX1-209ENST00000560448 HSD17B11Q8NBQ5 300 aa10.7□□□□□ -0.7
PKNOX1-209ENST00000560448 SH3BGRL3Q9H299 93 aa10.7□□□□□ -0.7
PKNOX1-209ENST00000560448 CMYA5Q8N3K9 4069 aa10.7□□□□□ -0.7
PKNOX1-209ENST00000560448 TRAV30A0A087WSZ9 112 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 ZNF705EA8MWA4 302 aaPredicted RBP10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 NDUFA4O00483 81 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 SAP30O75446 220 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 IFNA10P01566 189 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 RAB11AP62491 216 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 Q56UQ5 140 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 OR2K2Q8NGT1 345 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 OR4X1Q8NH49 305 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 MARC2Q969Z3 335 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 PINX1Q96BK5 328 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 PARD6GQ9BYG4 376 aaPredicted RBP10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 STRAPQ9Y3F4 350 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 NOTCH3Q9UM47 2321 aa10.69□□□□□ -0.7
PKNOX1-209ENST00000560448 PPP5D1E7EU14 171 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 GNG7O60262 68 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 HBG1P69891 147 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 HBG2P69892 147 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 BLOC1S1P78537 153 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 PXDC1Q5TGL8 231 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 BTNL8Q6UX41 500 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 CACNG8Q8WXS5 425 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 UFC1Q9Y3C8 167 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 RFNGQ9Y644 331 aa10.68□□□□□ -0.7
PKNOX1-209ENST00000560448 RAB19A4D1S5 217 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 OR2T8A6NH00 312 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 C15orf62A8K5M9 175 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 F8W735 103 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 OR2C1O95371 312 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 IGHV3-23P01764 117 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 CTSGP08311 255 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 RAB5CP51148 216 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 SLC38A11Q08AI6 406 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 TMEM116Q8NCL8 245 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 GNPNAT1Q96EK6 184 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 S4R3C0 116 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 CLN5O75503 358 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 SCAF4O95104 1147 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 IGLV1-51P01701 117 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 GPX4P36969 197 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 ATP6V1FQ16864 119 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 VWC2Q2TAL6 325 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 Q6ZRG5 221 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 OR2G3Q8NGZ4 309 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 TMEM190Q8WZ59 177 aa10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 DAZ1Q9NQZ3 744 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 TECRQ9NZ01 308 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-209ENST00000560448 UMAD1C9J7I0 102 aa10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 K7EMT4 169 aa10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 IFNA5P01569 189 aa10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 IFNA4P05014 189 aa10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 DEFA6Q01524 100 aa10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 CD69Q07108 199 aa10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 UQCC3Q6UW78 93 aa10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 IL34Q6ZMJ4 242 aa10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 TMEM182Q6ZP80 229 aaPredicted RBP10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 WDR61Q9GZS3 305 aaKnown RBP10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 FNDC4Q9H6D8 234 aaPredicted RBP10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 MRPL27Q9P0M9 148 aaKnown RBP10.66□□□□□ -0.7
PKNOX1-209ENST00000560448 NBEAL1Q6ZS30 2694 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 ZNF320A2RRD8 509 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 C2orf70A6NJV1 201 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 CSN3P07498 182 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 BMI1P35226 326 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 ADMP35318 185 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 FHITP49789 147 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 OR8G2PQ6IF36 304 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 LCN12Q6JVE5 192 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 ZNF600Q6ZNG1 722 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 LILRB2Q8N423 598 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 TMEM170AQ8WVE7 144 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 LINC00052Q96N35 136 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 PSMG3Q9BT73 122 aaPredicted RBP10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 TMEM147Q9BVK8 224 aa10.65□□□□□ -0.7
PKNOX1-209ENST00000560448 IGHV3-21A0A0B4J1V1 117 aa10.64□□□□□ -0.71
PKNOX1-209ENST00000560448 PRSS46E5RG02 174 aa10.64□□□□□ -0.71
PKNOX1-209ENST00000560448 OR10P1Q8NGE3 313 aa10.64□□□□□ -0.71
PKNOX1-209ENST00000560448 SCGB1C1Q8TD33 95 aa10.64□□□□□ -0.71
PKNOX1-209ENST00000560448 CHRDL1Q9BU40 450 aa10.64□□□□□ -0.71
PKNOX1-209ENST00000560448 HRH4Q9H3N8 390 aa10.64□□□□□ -0.71
PKNOX1-209ENST00000560448 ZNF256Q9Y2P7 627 aaPredicted RBP10.64□□□□□ -0.71
PKNOX1-209ENST00000560448 TMEM213A2RRL7 107 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 KRBOX1C9JBD0 128 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 CD5P06127 495 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 FABP1P07148 127 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 C8orf88P0DMB2 117 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 FOLR2P14207 255 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 CBLN1P23435 193 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 CAMLGP49069 296 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 YPEL3P61236 119 aaPredicted RBP10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 SLC16A13Q7RTY0 426 aa10.63□□□□□ -0.71
PKNOX1-209ENST00000560448 BPIFCQ8NFQ6 507 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms