RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 IL4P05112 153 aa12.62□□□□□ -0.39
RPL28-209ENST00000560055 CAV2P51636 162 aa12.62□□□□□ -0.39
RPL28-209ENST00000560055 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
RPL28-209ENST00000560055 RBPMS2Q6ZRY4 209 aaKnown RBP12.62□□□□□ -0.39
RPL28-209ENST00000560055 GTSCR1Q86UQ5 136 aa12.62□□□□□ -0.39
RPL28-209ENST00000560055 OR51G1Q8NGK1 321 aa12.62□□□□□ -0.39
RPL28-209ENST00000560055 SPAG8Q99932 426 aaPredicted RBP12.62□□□□□ -0.39
RPL28-209ENST00000560055 GGACTQ9BVM4 153 aa12.62□□□□□ -0.39
RPL28-209ENST00000560055 SMAD5-AS1Q9Y6J3 95 aa12.62□□□□□ -0.39
RPL28-209ENST00000560055 COL7A1Q02388 2944 aa12.62□□□□□ -0.39
RPL28-209ENST00000560055 FAM24AA6NFZ4 105 aa12.61□□□□□ -0.39
RPL28-209ENST00000560055 H0YIZ8 118 aa12.61□□□□□ -0.39
RPL28-209ENST00000560055 BMI1P35226 326 aa12.61□□□□□ -0.39
RPL28-209ENST00000560055 RRAS2P62070 204 aaPredicted RBP12.61□□□□□ -0.39
RPL28-209ENST00000560055 AKR1C1Q04828 323 aa12.61□□□□□ -0.39
RPL28-209ENST00000560055 LAMTOR1Q6IAA8 161 aa12.61□□□□□ -0.39
RPL28-209ENST00000560055 PPP1R1CQ8WVI7 109 aa12.61□□□□□ -0.39
RPL28-209ENST00000560055 RNF125Q96EQ8 232 aa12.61□□□□□ -0.39
RPL28-209ENST00000560055 IGSF23A1L1A6 192 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 A8MZ25 164 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 CD5P06127 495 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 FABP1P07148 127 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 CD7P09564 240 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 CXCL3P19876 107 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 BCAP31P51572 246 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 TMEM252Q8N6L7 170 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 OR5AC2Q9NZP5 309 aa12.6□□□□□ -0.39
RPL28-209ENST00000560055 IGHV3-66A0A0C4DH42 116 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 A0A1W2PS18 150 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 SMCO3A2RU48 225 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 CST7O76096 145 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 HNRNPCP07910 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPL28-209ENST00000560055 IGHV4-30-4P0DP06 118 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 SULT1A1P50225 295 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 CD81P60033 236 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 LRRC37A5PQ49AS3 106 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 TMEM182Q6ZP80 229 aaPredicted RBP12.59□□□□□ -0.39
RPL28-209ENST00000560055 B9D2Q9BPU9 175 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 NEURL2Q9BR09 285 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 TMEM231Q9H6L2 316 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 NPVFQ9HCQ7 196 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 C19orf73Q9NVV2 129 aa12.59□□□□□ -0.39
RPL28-209ENST00000560055 E5RGE8 158 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 DFFBO76075 338 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 MPC2O95563 127 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 CFDP00746 253 aaPredicted RBP12.58□□□□□ -0.4
RPL28-209ENST00000560055 RLN2P04090 185 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 P2RY1P47900 373 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 SLC38A11Q08AI6 406 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 OR2F1Q13607 317 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 FCN2Q15485 313 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 TCF24Q7RTU0 167 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 STPG3Q8N7X2 389 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 OR11H7Q8NGC8 314 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 RABAC1Q9UI14 185 aa12.58□□□□□ -0.4
RPL28-209ENST00000560055 BUB3O43684 328 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
RPL28-209ENST00000560055 VWC2Q2TAL6 325 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 TEPPQ6URK8 271 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 C16orf54Q6UWD8 224 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 CYP2G1PQ6ZSU1 146 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 STX12Q86Y82 276 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 TMEM217Q8N7C4 229 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 NARS2Q96I59 477 aaKnown RBP12.57□□□□□ -0.4
RPL28-209ENST00000560055 MED28Q9H204 178 aa12.57□□□□□ -0.4
RPL28-209ENST00000560055 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
RPL28-209ENST00000560055 FRMD6-AS1P0C7T7 363 aa12.56□□□□□ -0.4
RPL28-209ENST00000560055 GATA2P23769 480 aaPredicted RBP12.56□□□□□ -0.4
RPL28-209ENST00000560055 S100A11P31949 105 aa12.56□□□□□ -0.4
RPL28-209ENST00000560055 LYZP61626 148 aa12.56□□□□□ -0.4
RPL28-209ENST00000560055 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
RPL28-209ENST00000560055 PBDC1Q9BVG4 233 aa12.56□□□□□ -0.4
RPL28-209ENST00000560055 WFDC10AQ9H1F0 79 aa12.56□□□□□ -0.4
RPL28-209ENST00000560055 PET100P0DJ07 73 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 SELENOTP62341 195 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 HBG1P69891 147 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 HBG2P69892 147 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 EWSR1Q01844 656 aaKnown RBP eCLIP12.55□□□□□ -0.4
RPL28-209ENST00000560055 ODF3L2Q3SX64 289 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 BPIFCQ8NFQ6 507 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 FAM110AQ9BQ89 295 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 MS4A6AQ9H2W1 248 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 UQCC1Q9NVA1 299 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 SLC45A2Q9UMX9 530 aa12.55□□□□□ -0.4
RPL28-209ENST00000560055 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 TRAV2A0A0B4J234 112 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 LYL1P12980 280 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 NUP62P37198 522 aaPredicted RBP12.54□□□□□ -0.4
RPL28-209ENST00000560055 PLP1P60201 277 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 NHLH2Q02577 135 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 MGST2Q99735 147 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 TMEM147Q9BVK8 224 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 SLC25A31Q9H0C2 315 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 WDR83OSQ9Y284 106 aa12.54□□□□□ -0.4
RPL28-209ENST00000560055 AGPAT2O15120 278 aa12.53□□□□□ -0.4
RPL28-209ENST00000560055 LINC00869P0C866 280 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms