RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RIC1Q4ADV7 1423 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 FER1L6Q2WGJ9 1857 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 TRGV10A0A0A0MS01 117 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 A0A0D9SG52 128 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 A0A0J9YX75 114 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 TRBV10-2A0A0K0K1G8 114 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 A0A1W2PNM2 257 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 EFCAB10A6NFE3 127 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 G3V3Q6 166 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 H7BYZ3 331 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 TMEM256-PLSCR3K7ERE1 68 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 DBIP07108 87 aaKnown RBP1.91□□□□□ -2.1
SPG11-218ENST00000559754 COX6A1P12074 109 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 S100A11P31949 105 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 FUSP35637 526 aaKnown RBP eCLIP1.91□□□□□ -2.1
SPG11-218ENST00000559754 EIF2B2P49770 351 aaKnown RBP1.91□□□□□ -2.1
SPG11-218ENST00000559754 PSPHP78330 225 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 EIF3IQ13347 325 aaKnown RBP1.91□□□□□ -2.1
SPG11-218ENST00000559754 PYDC2Q56P42 97 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 BRMS1LQ5PSV4 323 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 PRR9Q5T870 116 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 AGTRAPQ6RW13 159 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 IFT20Q8IY31 132 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 OR5A1Q8NGJ0 315 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 TMEM106AQ96A25 262 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 YIPF3Q9GZM5 350 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 ZSWIM8A7E2V4 1837 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 TRPM1Q7Z4N2 1603 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 NCOA3Q9Y6Q9 1424 aa1.91□□□□□ -2.1
SPG11-218ENST00000559754 PTPRBP23467 1997 aa1.9□□□□□ -2.1
SPG11-218ENST00000559754 KMT2BQ9UMN6 2715 aaPredicted RBP1.9□□□□□ -2.1
SPG11-218ENST00000559754 CCDC88CQ9P219 2028 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 IGHV3-64A0A075B6Q5 118 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 TRAV5A0A0B4J249 113 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 C7orf71A4D174 169 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 OVOL1O14753 267 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 OR2T1O43869 369 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 LGALS3P17931 250 aaKnown RBP1.9□□□□□ -2.11
SPG11-218ENST00000559754 FKBP2P26885 142 aaKnown RBP1.9□□□□□ -2.11
SPG11-218ENST00000559754 AKR1C3P42330 323 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 SMIM21Q3B7S5 101 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 CCDC58Q4VC31 144 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 KHDC3LQ587J8 217 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 FAM27BQ5VT28 67 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 TMEM229BQ8NBD8 167 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 MRPL32Q9BYC8 188 aaKnown RBP1.9□□□□□ -2.11
SPG11-218ENST00000559754 RIMBP3CA6NJZ7 1639 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 RIMBP3BA6NNM3 1639 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 RIMBP3Q9UFD9 1639 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 KDM5BQ9UGL1 1544 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 TRAPPC8Q9Y2L5 1435 aa1.9□□□□□ -2.11
SPG11-218ENST00000559754 ERCC6Q03468 1493 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 HIVEP2P31629 2446 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 IGHV1-18A0A0C4DH31 117 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 TMEM189A5PLL7 270 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 ODF3BA8MYP8 253 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 GABARAPH6UMI1 98 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 CST7O76096 145 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 HTR1AP08908 422 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 P0DMU3 169 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 FAM231AP0DMU4 169 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 FAM231CP0DMU5 169 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 DYNLT3P51808 116 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 CKS1BP61024 79 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 ZNF90Q03938 601 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 NDUFA5Q16718 116 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 HRCT1Q6UXD1 115 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 DPPA3Q6W0C5 159 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 DEFB128Q7Z7B8 93 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 OR2T10Q8NGZ9 312 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 PKMYT1Q99640 499 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 OR2H1Q9GZK4 316 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 POPDC3Q9HBV1 291 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 OTORQ9NRC9 128 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 NHP2Q9NX24 153 aaKnown RBP1.89□□□□□ -2.11
SPG11-218ENST00000559754 TRAPPC2LQ9UL33 140 aa1.89□□□□□ -2.11
SPG11-218ENST00000559754 PAIP2BQ9ULR5 123 aaKnown RBP1.89□□□□□ -2.11
SPG11-218ENST00000559754 SCAF11Q99590 1463 aaKnown RBP1.88□□□□□ -2.11
SPG11-218ENST00000559754 MED23Q9ULK4 1368 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 NDUFB3O43676 98 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 IGLV6-57P01721 117 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 CLPSP04118 112 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 SCTP09683 121 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 METTL15P1P0C7V9 234 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 RHOGP84095 191 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 MYL5Q02045 173 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 MORN2Q502X0 79 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 PHF5AQ7RTV0 110 aaKnown RBP1.88□□□□□ -2.11
SPG11-218ENST00000559754 OR8I2Q8N0Y5 310 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 MRPS24Q96EL2 167 aaKnown RBP1.88□□□□□ -2.11
SPG11-218ENST00000559754 TSC22D3Q99576 134 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 Q9BRP9 147 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 ADAT1Q9BUB4 502 aaKnown RBP1.88□□□□□ -2.11
SPG11-218ENST00000559754 TCEAL2Q9H3H9 227 aaPredicted RBP1.88□□□□□ -2.11
SPG11-218ENST00000559754 NAT8BQ9UHF3 227 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 OVOS2A0A0G2JMS6 1433 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 CEP164Q9UPV0 1460 aa1.88□□□□□ -2.11
SPG11-218ENST00000559754 STRCQ7RTU9 1775 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 ANAPC1Q9H1A4 1944 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms