RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 TMEM230Q96A57 120 aa7.95□□□□□ -1.14
HERC1-204ENST00000559715 RABAC1Q9UI14 185 aa7.95□□□□□ -1.14
HERC1-204ENST00000559715 LYRM1O43325 122 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 MED14OSP0DP75 135 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 UBE2MP61081 183 aaKnown RBP7.94□□□□□ -1.14
HERC1-204ENST00000559715 ASAH1Q13510 395 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 TMEM41BQ5BJD5 291 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 MORN3Q6PF18 240 aaPredicted RBP7.94□□□□□ -1.14
HERC1-204ENST00000559715 TMEM170AQ8WVE7 144 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 GLMPQ8WWB7 406 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 RAB40CQ96S21 281 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 TMEM222Q9H0R3 208 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 TBC1D24Q9ULP9 559 aa7.94□□□□□ -1.14
HERC1-204ENST00000559715 PIGBOS1A0A0B4J2F0 54 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 TEX13DA0A0J9YY54 714 aaPredicted RBP7.93□□□□□ -1.14
HERC1-204ENST00000559715 ATG12O94817 140 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 NXPH3O95157 252 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 CDS2O95674 445 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 OR5AC1P0C628 307 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 RPL11P62913 178 aaKnown RBP7.93□□□□□ -1.14
HERC1-204ENST00000559715 SUPT4H1P63272 117 aaKnown RBP7.93□□□□□ -1.14
HERC1-204ENST00000559715 DHODHQ02127 395 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 TIGITQ495A1 244 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 TMEM128Q5BJH2 165 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 ACTL10Q5JWF8 245 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 C16orf54Q6UWD8 224 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 Q6ZR54 194 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 POM121L12Q8N7R1 296 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 STXBP6Q8NFX7 210 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 GLYATL2Q8WU03 294 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 IL22RA2Q969J5 263 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
HERC1-204ENST00000559715 DEFB131BA0A096LNP1 70 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 IGLC1P0CG04 106 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 SNCAP37840 140 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 CCR6P51684 374 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 SRPXP78539 464 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 SP6Q3SY56 376 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 PRSS54Q6PEW0 395 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 ZNF705AQ6ZN79 300 aaPredicted RBP7.92□□□□□ -1.14
HERC1-204ENST00000559715 FAM219AQ8IW50 185 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 CENPSQ8N2Z9 138 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 RBPMSQ93062 196 aaKnown RBP7.92□□□□□ -1.14
HERC1-204ENST00000559715 METTL26Q96S19 204 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 TMEM231Q9H6L2 316 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 KCNIP3Q9Y2W7 256 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 TMEM56-RWDD3S4R434 201 aa7.92□□□□□ -1.14
HERC1-204ENST00000559715 LINC00854A0A1B0GVQ3 168 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 A0A1W2PS18 150 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 PRSS29PA6NIE9 313 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 ZNF705FA8MVS1 300 aaPredicted RBP7.91□□□□□ -1.14
HERC1-204ENST00000559715 FAM90A26D6RGX4 464 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 H3BMM0 161 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 ZNF705DP0CH99 300 aaPredicted RBP7.91□□□□□ -1.14
HERC1-204ENST00000559715 ZNF705BP0CI00 300 aaPredicted RBP7.91□□□□□ -1.14
HERC1-204ENST00000559715 ANXA3P12429 323 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 DEFB1P60022 68 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 IFITM3Q01628 133 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 USF2Q15853 346 aaPredicted RBP7.91□□□□□ -1.14
HERC1-204ENST00000559715 TRIM16LQ309B1 348 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 LGALS9BQ3B8N2 356 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 GDF5OSQ5U4N7 250 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 MZT2BQ6NZ67 158 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 TMED4Q7Z7H5 227 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 LRTM2Q8N967 370 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 LHFPL5Q8TAF8 219 aa7.91□□□□□ -1.14
HERC1-204ENST00000559715 HERC1Q15751 4861 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 A0A0B4J2A0 478 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 DUXBA0A1W2PPF3 345 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 M0R2N4 97 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 CORTO00230 105 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 BUB3O43684 328 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 SFT2D2O95562 160 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 IFNA17P01571 189 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 TCRBP04435 133 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 AKR1C4P17516 323 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 AKR1C2P52895 323 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 YPEL3P61236 119 aaPredicted RBP7.9□□□□□ -1.14
HERC1-204ENST00000559715 PPP1R1AQ13522 171 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 PSMG4Q5JS54 123 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 SELENOHQ8IZQ5 122 aaKnown RBP7.9□□□□□ -1.14
HERC1-204ENST00000559715 LGI3Q8N145 548 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 SLC35G3Q8N808 338 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 C20orf85Q9H1P6 137 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 SEPSECSQ9HD40 501 aaKnown RBP7.9□□□□□ -1.14
HERC1-204ENST00000559715 SHPKQ9UHJ6 478 aa7.9□□□□□ -1.14
HERC1-204ENST00000559715 HELTA6NFD8 242 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 P0DMU3 169 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 FAM231AP0DMU4 169 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 FAM231CP0DMU5 169 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 OPRK1P41145 380 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 DEFA1P59665 94 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 DEFA3P59666 94 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 DHRS2Q13268 280 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 C2orf83Q53S99 150 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 NMSQ5H8A3 153 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 TMEM268Q5VZI3 342 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 RRNAD1Q96FB5 475 aaKnown RBP7.89□□□□□ -1.15
HERC1-204ENST00000559715 NEU1Q99519 415 aa7.89□□□□□ -1.15
HERC1-204ENST00000559715 NUDT15Q9NV35 164 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms