RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 RPEL1Q2QD12 228 aa8.78□□□□□ -1
SPG11-217ENST00000559511 LURAP1LQ8IV03 231 aa8.78□□□□□ -1
SPG11-217ENST00000559511 PERPQ96FX8 193 aa8.78□□□□□ -1
SPG11-217ENST00000559511 CDC42EP3Q9UKI2 254 aa8.78□□□□□ -1
SPG11-217ENST00000559511 TRAV9-1A0A075B6T8 112 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 A0A1B0GUS0 222 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 NBR2O15453 112 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 CNIH1O95406 144 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 MGST1P10620 155 aaKnown RBP8.77□□□□□ -1.01
SPG11-217ENST00000559511 ADMP35318 185 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 MYCNOSP40205 109 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 GPR6P46095 362 aaPredicted RBP8.77□□□□□ -1.01
SPG11-217ENST00000559511 ASPHD1Q5U4P2 390 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 OR8I2Q8N0Y5 310 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 BLNKQ8WV28 456 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 WNT10AQ9GZT5 417 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 MED13LQ71F56 2210 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 TRAV34A0A0B4J273 112 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 PEX7O00628 323 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 ISLRO14498 428 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 HYPMO75409 117 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 IGLC1P0CG04 106 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 RD3LP0DJH9 198 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 ZFP36P26651 326 aaKnown RBP8.77□□□□□ -1.01
SPG11-217ENST00000559511 RANP62826 216 aaKnown RBP8.77□□□□□ -1.01
SPG11-217ENST00000559511 GNG5P63218 68 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 LEMD1Q68G75 181 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 FAM103A1Q9BTL3 118 aaKnown RBP8.77□□□□□ -1.01
SPG11-217ENST00000559511 OSTCQ9NRP0 149 aa8.77□□□□□ -1.01
SPG11-217ENST00000559511 COL12A1Q99715 3063 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 NDUFA3O95167 84 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 PSG1P11464 419 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 GP9P14770 177 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 EFNA4P52798 201 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 TAS2R60P59551 318 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 PLP1P60201 277 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 IBA57Q5T440 356 aaKnown RBP8.76□□□□□ -1.01
SPG11-217ENST00000559511 VMO1Q7Z5L0 202 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 DYNAPQ8N1N2 210 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 STXBP6Q8NFX7 210 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 NPBQ8NG41 125 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 OR1L6Q8NGR2 347 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 PRDM13Q9H4Q3 707 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 CELSR1Q9NYQ6 3014 aa8.76□□□□□ -1.01
SPG11-217ENST00000559511 CEACAM3P40198 252 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 SSX2Q16385 188 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 SRSF8Q9BRL6 282 aaKnown RBP8.75□□□□□ -1.01
SPG11-217ENST00000559511 H3BTX0 84 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 K7EIM0 57 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 OVOL3O00110 214 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 SPINK4O60575 86 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 HIST1H1BP16401 226 aaKnown RBP8.75□□□□□ -1.01
SPG11-217ENST00000559511 IER3P46695 156 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 TCL1AP56279 114 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 LYZP61626 148 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 HES1Q14469 280 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 TMEM256Q8N2U0 113 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 LINC00469Q8N7U9 141 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
SPG11-217ENST00000559511 FLNCQ14315 2725 aa8.75□□□□□ -1.01
SPG11-217ENST00000559511 GRIFINA4D1Z8 144 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 NUPR1O60356 82 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 CA1P00915 261 aaPredicted RBP8.74□□□□□ -1.01
SPG11-217ENST00000559511 IGKV1-17P01599 117 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 NBEAP1P0C6P0 100 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 HOXB4P17483 251 aaPredicted RBP8.74□□□□□ -1.01
SPG11-217ENST00000559511 BTF3P20290 206 aaKnown RBP8.74□□□□□ -1.01
SPG11-217ENST00000559511 SLC35B1P78383 322 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 GBGT1Q8N5D6 347 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 FAM168AQ92567 244 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 HIGD1AQ9Y241 93 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 PGPA6NDG6 321 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 SLC25A5P05141 298 aaKnown RBP8.74□□□□□ -1.01
SPG11-217ENST00000559511 RNF224P0DH78 156 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 CX3CL1P78423 397 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 JOSD1Q15040 202 aaPredicted RBP8.74□□□□□ -1.01
SPG11-217ENST00000559511 C5orf64Q2M2E5 130 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 KLF17Q5JT82 389 aaPredicted RBP8.74□□□□□ -1.01
SPG11-217ENST00000559511 C1orf122Q6ZSJ8 110 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 BAGE2Q86Y30 109 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 SGK494Q96LW2 274 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 RASL11BQ9BPW5 248 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 SERTAD4Q9NUC0 356 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 TP53TG3Q9ULZ0 132 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 EPDR1Q9UM22 224 aa8.74□□□□□ -1.01
SPG11-217ENST00000559511 SPTAN1Q13813 2472 aaKnown RBP8.73□□□□□ -1.01
SPG11-217ENST00000559511 ZNF705GA8MUZ8 300 aaPredicted RBP8.73□□□□□ -1.01
SPG11-217ENST00000559511 SNURFLB1AK76 121 aa8.73□□□□□ -1.01
SPG11-217ENST00000559511 GZMBP10144 247 aa8.73□□□□□ -1.01
SPG11-217ENST00000559511 TMEM183BQ1AE95 376 aa8.73□□□□□ -1.01
SPG11-217ENST00000559511 DNLZQ5SXM8 178 aa8.73□□□□□ -1.01
SPG11-217ENST00000559511 KIR3DL3Q8N743 410 aa8.73□□□□□ -1.01
SPG11-217ENST00000559511 SLC25A39Q9BZJ4 359 aaPredicted RBP8.73□□□□□ -1.01
SPG11-217ENST00000559511 DOPEY1Q5JWR5 2465 aa8.73□□□□□ -1.01
SPG11-217ENST00000559511 USP9XQ93008 2570 aaPredicted RBP8.73□□□□□ -1.01
SPG11-217ENST00000559511 PRB1P04280 392 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 NDPQ00604 133 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 ZNF600Q6ZNG1 722 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 TMEM18Q96B42 140 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms