RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RNF2Q99496 336 aa15.25■□□□□ 0.03
TSPAN3-207ENST00000559494 VSIRQ9H7M9 311 aa15.25■□□□□ 0.03
TSPAN3-207ENST00000559494 OR5AC2Q9NZP5 309 aa15.25■□□□□ 0.03
TSPAN3-207ENST00000559494 TRAV25A0A0B4J276 109 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 IGSF23A1L1A6 192 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 SMCO3A2RU48 225 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 RLN2P04090 185 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 IL4P05112 153 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 AKR1C1Q04828 323 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 OR2F1Q13607 317 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 USF2Q15853 346 aaPredicted RBP15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 GUCA2BQ16661 112 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 OR51G1Q8NGK1 321 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 ST8SIA2Q92186 375 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 METTL26Q96S19 204 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 RNF126Q9BV68 326 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 U3KQE9 123 aa15.24■□□□□ 0.03
TSPAN3-207ENST00000559494 IGHV3-66A0A0C4DH42 116 aa15.23■□□□□ 0.03
TSPAN3-207ENST00000559494 FNDC10F2Z333 226 aa15.23■□□□□ 0.03
TSPAN3-207ENST00000559494 FAM90A2PQ658T7 463 aa15.23■□□□□ 0.03
TSPAN3-207ENST00000559494 TMEM182Q6ZP80 229 aaPredicted RBP15.23■□□□□ 0.03
TSPAN3-207ENST00000559494 RBPMS2Q6ZRY4 209 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-207ENST00000559494 GGACTQ9BVM4 153 aa15.23■□□□□ 0.03
TSPAN3-207ENST00000559494 NPVFQ9HCQ7 196 aa15.23■□□□□ 0.03
TSPAN3-207ENST00000559494 E5RGE8 158 aa15.22■□□□□ 0.03
TSPAN3-207ENST00000559494 MPC2O95563 127 aa15.22■□□□□ 0.03
TSPAN3-207ENST00000559494 TMEM217Q8N7C4 229 aa15.22■□□□□ 0.03
TSPAN3-207ENST00000559494 DNAH9Q9NYC9 4486 aa15.22■□□□□ 0.03
TSPAN3-207ENST00000559494 TSPAN4O14817 238 aa15.21■□□□□ 0.03
TSPAN3-207ENST00000559494 FABP1P07148 127 aa15.21■□□□□ 0.03
TSPAN3-207ENST00000559494 CD7P09564 240 aa15.21■□□□□ 0.03
TSPAN3-207ENST00000559494 GATA2P23769 480 aaPredicted RBP15.21■□□□□ 0.03
TSPAN3-207ENST00000559494 SULT1A1P50225 295 aa15.21■□□□□ 0.03
TSPAN3-207ENST00000559494 SLC38A11Q08AI6 406 aa15.21■□□□□ 0.03
TSPAN3-207ENST00000559494 LAMTOR1Q6IAA8 161 aa15.21■□□□□ 0.03
TSPAN3-207ENST00000559494 RNF125Q96EQ8 232 aa15.21■□□□□ 0.03
TSPAN3-207ENST00000559494 HNRNPCP07910 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
TSPAN3-207ENST00000559494 P2RY1P47900 373 aa15.2■□□□□ 0.02
TSPAN3-207ENST00000559494 TGP01266 2768 aa15.2■□□□□ 0.02
TSPAN3-207ENST00000559494 A0A1W2PS18 150 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 DFFBO76075 338 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 S100A11P31949 105 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 BMI1P35226 326 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 LYZP61626 148 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 NHLH2Q02577 135 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 Q6ZNX1 250 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 CYP2G1PQ6ZSU1 146 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 TCF24Q7RTU0 167 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 SPAG8Q99932 426 aaPredicted RBP15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 PBDC1Q9BVG4 233 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 RABAC1Q9UI14 185 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 SMAD5-AS1Q9Y6J3 95 aa15.19■□□□□ 0.02
TSPAN3-207ENST00000559494 CD81P60033 236 aa15.18■□□□□ 0.02
TSPAN3-207ENST00000559494 TEPPQ6URK8 271 aa15.18■□□□□ 0.02
TSPAN3-207ENST00000559494 GTSCR1Q86UQ5 136 aa15.18■□□□□ 0.02
TSPAN3-207ENST00000559494 STX12Q86Y82 276 aa15.18■□□□□ 0.02
TSPAN3-207ENST00000559494 STPG3Q8N7X2 389 aa15.18■□□□□ 0.02
TSPAN3-207ENST00000559494 NEURL2Q9BR09 285 aa15.18■□□□□ 0.02
TSPAN3-207ENST00000559494 CFDP00746 253 aaPredicted RBP15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 EIF2B2P49770 351 aaKnown RBP15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 EWSR1Q01844 656 aaKnown RBP eCLIP15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 C16orf54Q6UWD8 224 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 BPIFCQ8NFQ6 507 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 NARS2Q96I59 477 aaKnown RBP15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 SLC25A31Q9H0C2 315 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 TMEM231Q9H6L2 316 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 IGKV3-7A0A075B6H7 116 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 BUB3O43684 328 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 CD5P06127 495 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 VWC2Q2TAL6 325 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 GBGT1Q8N5D6 347 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 CHAC2Q8WUX2 184 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 UQCC1Q9NVA1 299 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 C19orf73Q9NVV2 129 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 MBD2Q9UBB5 411 aa15.17■□□□□ 0.02
TSPAN3-207ENST00000559494 PET100P0DJ07 73 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 IGHV4-30-4P0DP06 118 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 LYL1P12980 280 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 HBG1P69891 147 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 HBG2P69892 147 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 ATP6V1FQ16864 119 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 GLMPQ8WWB7 406 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 GRAMD2BQ96HH9 432 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 MGST2Q99735 147 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 TMEM147Q9BVK8 224 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 SLC45A2Q9UMX9 530 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 WDR83OSQ9Y284 106 aa15.16■□□□□ 0.02
TSPAN3-207ENST00000559494 AGPAT2O15120 278 aa15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 GIPP09681 153 aaPredicted RBP15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 ORM2P19652 201 aa15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 TFPI2P48307 235 aa15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 SELENOTP62341 195 aa15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 Q5BKY6 102 aa15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 DEFB125Q8N687 156 aa15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 WFDC10AQ9H1F0 79 aa15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 MS4A6AQ9H2W1 248 aa15.15■□□□□ 0.02
TSPAN3-207ENST00000559494 A8MZ25 164 aa15.14■□□□□ 0.01
TSPAN3-207ENST00000559494 OR11H12B2RN74 326 aa15.14■□□□□ 0.01
TSPAN3-207ENST00000559494 PLP1P60201 277 aa15.14■□□□□ 0.01
TSPAN3-207ENST00000559494 RPL11P62913 178 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms