RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 HSPB7Q9UBY9 170 aa10.82□□□□□ -0.68
LRRC28-213ENST00000559399 SHPKQ9UHJ6 478 aa10.82□□□□□ -0.68
LRRC28-213ENST00000559399 TRAV10A0A0B4J240 114 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 PSG1P11464 419 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 TMBIM6P55061 237 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 NUTF2P61970 127 aaKnown RBP10.81□□□□□ -0.68
LRRC28-213ENST00000559399 PRR20EP86478 221 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 PRR20CP86479 221 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 PRR20DP86480 221 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 PRR20BP86481 221 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 PRR20AP86496 221 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 Q6ZTC4 211 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 LGI3Q8N145 548 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 C1QTNF4Q9BXJ3 329 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 APLNQ9ULZ1 77 aa10.81□□□□□ -0.68
LRRC28-213ENST00000559399 ELOA3CA0A087WX78 387 aaPredicted RBP10.8□□□□□ -0.68
LRRC28-213ENST00000559399 ANXA3P12429 323 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 AKR1C4P17516 323 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 ATP5IP56385 69 aaPredicted RBP10.8□□□□□ -0.68
LRRC28-213ENST00000559399 SUPT4H1P63272 117 aaKnown RBP10.8□□□□□ -0.68
LRRC28-213ENST00000559399 KLF9Q13886 244 aaPredicted RBP10.8□□□□□ -0.68
LRRC28-213ENST00000559399 LYZL2Q7Z4W2 148 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 OR51G1Q8NGK1 321 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 RNF125Q96EQ8 232 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 PBDC1Q9BVG4 233 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 RBKSQ9H477 322 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 PFDN2Q9UHV9 154 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 KMT2AQ03164 3969 aa10.8□□□□□ -0.68
LRRC28-213ENST00000559399 PIGBOS1A0A0B4J2F0 54 aa10.79□□□□□ -0.68
LRRC28-213ENST00000559399 ZFP92A6NM28 416 aa10.79□□□□□ -0.68
LRRC28-213ENST00000559399 H3BMM0 161 aa10.79□□□□□ -0.68
LRRC28-213ENST00000559399 NOL3O60936 208 aaKnown RBP10.79□□□□□ -0.68
LRRC28-213ENST00000559399 OR8G2PQ6IF36 304 aa10.79□□□□□ -0.68
LRRC28-213ENST00000559399 SLC35E1Q96K37 410 aa10.79□□□□□ -0.68
LRRC28-213ENST00000559399 SLIRPQ9GZT3 109 aaKnown RBP10.79□□□□□ -0.68
LRRC28-213ENST00000559399 FABP12A6NFH5 140 aa10.78□□□□□ -0.68
LRRC28-213ENST00000559399 HLA-DRB4P13762 266 aa10.78□□□□□ -0.68
LRRC28-213ENST00000559399 NKX2-1P43699 371 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-213ENST00000559399 OR1S1Q8NH92 325 aa10.78□□□□□ -0.68
LRRC28-213ENST00000559399 HLA-DRB4X5D2U9 266 aa10.78□□□□□ -0.68
LRRC28-213ENST00000559399 FRAS1Q86XX4 4008 aa10.78□□□□□ -0.68
LRRC28-213ENST00000559399 IGHV4-4A0A075B6R2 117 aa10.77□□□□□ -0.69
LRRC28-213ENST00000559399 FABP1P07148 127 aa10.77□□□□□ -0.69
LRRC28-213ENST00000559399 TNFSF8P32971 234 aa10.77□□□□□ -0.69
LRRC28-213ENST00000559399 FAUP35544 74 aaKnown RBP10.77□□□□□ -0.69
LRRC28-213ENST00000559399 GPX4P36969 197 aaPredicted RBP10.77□□□□□ -0.69
LRRC28-213ENST00000559399 ZNF90Q03938 601 aa10.77□□□□□ -0.69
LRRC28-213ENST00000559399 GAMTQ14353 236 aa10.77□□□□□ -0.69
LRRC28-213ENST00000559399 SOSTQ9BQB4 213 aa10.77□□□□□ -0.69
LRRC28-213ENST00000559399 XCL2Q9UBD3 114 aa10.77□□□□□ -0.69
LRRC28-213ENST00000559399 CELA1Q9UNI1 258 aa10.77□□□□□ -0.69
LRRC28-213ENST00000559399 IGKV1D-37A0A075B6S9 117 aa10.76□□□□□ -0.69
LRRC28-213ENST00000559399 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
LRRC28-213ENST00000559399 LYZP61626 148 aa10.76□□□□□ -0.69
LRRC28-213ENST00000559399 TMED4Q7Z7H5 227 aa10.76□□□□□ -0.69
LRRC28-213ENST00000559399 MCFD2Q8NI22 146 aa10.76□□□□□ -0.69
LRRC28-213ENST00000559399 RNF126Q9BV68 326 aa10.76□□□□□ -0.69
LRRC28-213ENST00000559399 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 H3BMQ9 156 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 AMBPP02760 352 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 ID1P41134 155 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 PSMB3P49720 205 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 AP3S2P59780 193 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 C12orf74Q32Q52 190 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 C1orf194Q5T5A4 169 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 ZNF705AQ6ZN79 300 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-213ENST00000559399 ZNF767PQ75MW2 155 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 COQ8AQ8NI60 647 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 TRIM63Q969Q1 353 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 LINC00052Q96N35 136 aa10.75□□□□□ -0.69
LRRC28-213ENST00000559399 WDR12Q9GZL7 423 aaKnown RBP10.75□□□□□ -0.69
LRRC28-213ENST00000559399 SNRPGP15A8MWD9 76 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 PITX3O75364 302 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 IGKV3-20P01619 116 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 VAMP1P23763 118 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 RAB11AP62491 216 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 TMEM128Q5BJH2 165 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 GDF5OSQ5U4N7 250 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 FOXI2Q6ZQN5 318 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 PPP1R14BQ96C90 147 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 TRGV9Q99603 122 aa10.74□□□□□ -0.69
LRRC28-213ENST00000559399 SAV1Q9H4B6 383 aaPredicted RBP10.74□□□□□ -0.69
LRRC28-213ENST00000559399 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-213ENST00000559399 SOCS3O14543 225 aa10.73□□□□□ -0.69
LRRC28-213ENST00000559399 ZNF705DP0CH99 300 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-213ENST00000559399 ZNF705BP0CI00 300 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-213ENST00000559399 IAPPP10997 89 aa10.73□□□□□ -0.69
LRRC28-213ENST00000559399 DEFB1P60022 68 aa10.73□□□□□ -0.69
LRRC28-213ENST00000559399 OR2F1Q13607 317 aa10.73□□□□□ -0.69
LRRC28-213ENST00000559399 TOMM5Q8N4H5 51 aa10.73□□□□□ -0.69
LRRC28-213ENST00000559399 LRTM2Q8N967 370 aa10.73□□□□□ -0.69
LRRC28-213ENST00000559399 NEU1Q99519 415 aa10.73□□□□□ -0.69
LRRC28-213ENST00000559399 PAIP2BQ9ULR5 123 aaKnown RBP10.73□□□□□ -0.69
LRRC28-213ENST00000559399 VPS13DQ5THJ4 4388 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 TMEM189A5PLL7 270 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 SMIM9A6NGZ8 99 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 MED6O75586 246 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 SLC25A6P12236 298 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 FXYD7P58549 80 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 PYDC2Q56P42 97 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms