RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZNF329Q86UD4 541 aa12.88□□□□□ -0.35
TPM1-219ENST00000559397 OR5T1Q8NG75 326 aa12.88□□□□□ -0.35
TPM1-219ENST00000559397 FAM110DQ8TAY7 271 aaPredicted RBP12.88□□□□□ -0.35
TPM1-219ENST00000559397 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
TPM1-219ENST00000559397 CARHSP1Q9Y2V2 147 aaKnown RBP12.88□□□□□ -0.35
TPM1-219ENST00000559397 LOC102723971A0A1B0GUV8 181 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 A0A1W2PPV4 95 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 ZFP92A6NM28 416 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
TPM1-219ENST00000559397 IGLV1-40P01703 118 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 STAG3L3P0CL85 134 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 RHOBP62745 196 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 ICAM4Q14773 271 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 HAGHQ16775 308 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 KLHDC1Q8N7A1 406 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 SEC11CQ9BY50 192 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
TPM1-219ENST00000559397 IGHV3-21A0A0B4J1V1 117 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 IGHG4P01861 327 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 SFTA3P0C7M3 94 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 ZNF90Q03938 601 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
TPM1-219ENST00000559397 HSPB1P04792 205 aaKnown RBP12.86□□□□□ -0.35
TPM1-219ENST00000559397 OR5G3P0C626 314 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 IGLC1P0CG04 106 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 BCL2P10415 239 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 SLC35B1P78383 322 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 SLC35B3Q9H1N7 401 aa12.86□□□□□ -0.35
TPM1-219ENST00000559397 F8W036 122 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 HAX1O00165 279 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 BRI3O95415 125 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 PSMB8P28062 276 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 AWAT1Q58HT5 328 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 OR5AU1Q8NGC0 362 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 TMEM37Q8WXS4 190 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 TMEM158Q8WZ71 300 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 TMPRSS5Q9H3S3 457 aa12.85□□□□□ -0.35
TPM1-219ENST00000559397 CLN5O75503 358 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 IFNA1P01562 189 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 APOC3P02656 99 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
TPM1-219ENST00000559397 HIST1H1BP16401 226 aaKnown RBP12.84□□□□□ -0.35
TPM1-219ENST00000559397 PSMB3P49720 205 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 PPT1P50897 306 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 TEX38Q6PEX7 206 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 THYN1Q9P016 225 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 FUT9Q9Y231 359 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 ANK2Q01484 3957 aa12.84□□□□□ -0.35
TPM1-219ENST00000559397 H3BUA1 57 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 NDUFS6O75380 124 aaKnown RBP12.83□□□□□ -0.35
TPM1-219ENST00000559397 NDUFB8O95169 186 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 CXorf1O96002 111 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.35
TPM1-219ENST00000559397 RIPPLY3P57055 190 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 KRTAP10-3P60369 221 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 FOXE3Q13461 319 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 FAM78BQ5VT40 261 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 RNF152Q8N8N0 203 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 RXFP4Q8TDU9 374 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 RNF2Q99496 336 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 KLK15Q9H2R5 256 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 DNAJC4Q9NNZ3 241 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 MANBALQ9NQG1 85 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 VAX2Q9UIW0 290 aa12.83□□□□□ -0.35
TPM1-219ENST00000559397 TRBV9A0A0B4J1U6 114 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 IGKV1-17P01599 117 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 ELANEP08246 267 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 ARL14EPLP0DKL9 152 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 PLP1P60201 277 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 TCTEX1D4Q5JR98 221 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 PATE2Q6UY27 113 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 MIR17HGQ75NE6 70 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 OR1L4Q8NGR5 311 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 PFDN5Q99471 154 aa12.83□□□□□ -0.36
TPM1-219ENST00000559397 MRPL32Q9BYC8 188 aaKnown RBP12.83□□□□□ -0.36
TPM1-219ENST00000559397 F8W735 103 aaPredicted RBP12.82□□□□□ -0.36
TPM1-219ENST00000559397 RAB9AP51151 201 aa12.82□□□□□ -0.36
TPM1-219ENST00000559397 MFAP4P55083 255 aa12.82□□□□□ -0.36
TPM1-219ENST00000559397 LCNL1Q6ZST4 164 aa12.82□□□□□ -0.36
TPM1-219ENST00000559397 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
TPM1-219ENST00000559397 WFDC12Q8WWY7 111 aa12.82□□□□□ -0.36
TPM1-219ENST00000559397 MS4A10Q96PG2 267 aa12.82□□□□□ -0.36
TPM1-219ENST00000559397 ZNF355PQ9NSJ1 428 aa12.82□□□□□ -0.36
TPM1-219ENST00000559397 OR2J3O76001 311 aa12.81□□□□□ -0.36
TPM1-219ENST00000559397 PF4V1P10720 104 aa12.81□□□□□ -0.36
TPM1-219ENST00000559397 FCGR2BP31994 310 aaPredicted RBP12.81□□□□□ -0.36
TPM1-219ENST00000559397 NPBWR1P48145 328 aa12.81□□□□□ -0.36
TPM1-219ENST00000559397 KIAA0141Q14154 515 aaPredicted RBP12.81□□□□□ -0.36
TPM1-219ENST00000559397 GUCA2BQ16661 112 aa12.81□□□□□ -0.36
TPM1-219ENST00000559397 TIGITQ495A1 244 aa12.81□□□□□ -0.36
TPM1-219ENST00000559397 MYOZ3Q8TDC0 251 aa12.81□□□□□ -0.36
TPM1-219ENST00000559397 TECRQ9NZ01 308 aaKnown RBP12.81□□□□□ -0.36
TPM1-219ENST00000559397 TRAV30A0A087WSZ9 112 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 ELOA3CA0A087WX78 387 aaPredicted RBP12.8□□□□□ -0.36
TPM1-219ENST00000559397 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 RPLP1P05386 114 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms