RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 GRAMD2BQ96HH9 432 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 SLC35E1Q96K37 410 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 CIB3Q96Q77 187 aaPredicted RBP8.08□□□□□ -1.12
SPG11-216ENST00000559347 MAGT1Q9H0U3 335 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 C20orf85Q9H1P6 137 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 RABAC1Q9UI14 185 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 TP53TG1Q9Y2A0 90 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 K7EQG2 157 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 DNASE2O00115 360 aaPredicted RBP8.07□□□□□ -1.12
SPG11-216ENST00000559347 WRBO00258 174 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 UBE2CO00762 179 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 LYRM1O43325 122 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 RD3LP0DJH9 198 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 PSG1P11464 419 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 GPX4P36969 197 aaPredicted RBP8.07□□□□□ -1.12
SPG11-216ENST00000559347 CMC4P56277 68 aaPredicted RBP8.07□□□□□ -1.12
SPG11-216ENST00000559347 RAB11AP62491 216 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 C4orf46Q504U0 113 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 C16orf54Q6UWD8 224 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 WFDC3Q8IUB2 231 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 STPG3Q8N7X2 389 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 STXBP6Q8NFX7 210 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 COQ8AQ8NI60 647 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 DCANP1Q8TF63 244 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 RNF125Q96EQ8 232 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 AGRNO00468 2067 aa8.07□□□□□ -1.12
SPG11-216ENST00000559347 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
SPG11-216ENST00000559347 IGKV1OR2-108A0A075B7D4 117 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 HELTA6NFD8 242 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 ZFP92A6NM28 416 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 H3BP45 60 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 SPRY2O43597 315 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 EIF2B2P49770 351 aaKnown RBP8.06□□□□□ -1.12
SPG11-216ENST00000559347 DEFB131AP59861 70 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 ZNF90Q03938 601 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 LEMD1Q68G75 181 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 LINC00299Q6ZSB3 139 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 OR51G1Q8NGK1 321 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 OR4D5Q8NGN0 318 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 RNF183Q96D59 192 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 CCDC32Q9BV29 185 aa8.06□□□□□ -1.12
SPG11-216ENST00000559347 PAIP2BQ9ULR5 123 aaKnown RBP8.06□□□□□ -1.12
SPG11-216ENST00000559347 BUB3O43684 328 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 IFNA21P01568 189 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 ZNF688P0C7X2 276 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 NKX2-1P43699 371 aaPredicted RBP8.05□□□□□ -1.12
SPG11-216ENST00000559347 POLR2GP62487 172 aaKnown RBP eCLIP8.05□□□□□ -1.12
SPG11-216ENST00000559347 RPP30P78346 268 aaKnown RBP8.05□□□□□ -1.12
SPG11-216ENST00000559347 ID3Q02535 119 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 CNPY1Q3B7I2 92 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 SPANXN5Q5MJ07 72 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 OR8G2PQ6IF36 304 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 SIGLEC15Q6ZMC9 328 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 THAP8Q8NA92 274 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 MITD1Q8WV92 249 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 TRGV9Q99603 122 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 PBDC1Q9BVG4 233 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 NUDT15Q9NV35 164 aa8.05□□□□□ -1.12
SPG11-216ENST00000559347 HYDINQ4G0P3 5121 aa8.04□□□□□ -1.12
SPG11-216ENST00000559347 A0A0J9YWU9 116 aa8.04□□□□□ -1.12
SPG11-216ENST00000559347 SSSCA1O60232 199 aa8.04□□□□□ -1.12
SPG11-216ENST00000559347 TCRBP04435 133 aa8.04□□□□□ -1.12
SPG11-216ENST00000559347 FABP1P07148 127 aa8.04□□□□□ -1.12
SPG11-216ENST00000559347 NUP62P37198 522 aaPredicted RBP8.04□□□□□ -1.12
SPG11-216ENST00000559347 ACOT7LQ6ZUV0 252 aa8.04□□□□□ -1.12
SPG11-216ENST00000559347 IL17DQ8TAD2 202 aa8.04□□□□□ -1.12
SPG11-216ENST00000559347 CSTL1Q9H114 145 aa8.04□□□□□ -1.12
SPG11-216ENST00000559347 STRAPQ9Y3F4 350 aaKnown RBP8.04□□□□□ -1.12
SPG11-216ENST00000559347 TRAV6A0A075B6T7 132 aa8.03□□□□□ -1.12
SPG11-216ENST00000559347 SCGB1D2O95969 90 aa8.03□□□□□ -1.12
SPG11-216ENST00000559347 CA1P00915 261 aaPredicted RBP8.03□□□□□ -1.12
SPG11-216ENST00000559347 AP2S1P53680 142 aaPredicted RBP8.03□□□□□ -1.12
SPG11-216ENST00000559347 LYZP61626 148 aa8.03□□□□□ -1.12
SPG11-216ENST00000559347 EWSR1Q01844 656 aaKnown RBP eCLIP8.03□□□□□ -1.12
SPG11-216ENST00000559347 IAH1Q2TAA2 248 aaPredicted RBP8.03□□□□□ -1.12
SPG11-216ENST00000559347 TRPT1Q86TN4 253 aaKnown RBP8.03□□□□□ -1.12
SPG11-216ENST00000559347 ZBTB8BQ8NAP8 495 aaPredicted RBP8.03□□□□□ -1.12
SPG11-216ENST00000559347 GATAD1Q8WUU5 269 aa8.03□□□□□ -1.12
SPG11-216ENST00000559347 S100ZQ8WXG8 99 aa8.03□□□□□ -1.12
SPG11-216ENST00000559347 NRN1Q9NPD7 142 aa8.03□□□□□ -1.12
SPG11-216ENST00000559347 TBC1D24Q9ULP9 559 aa8.03□□□□□ -1.12
SPG11-216ENST00000559347 RCL1Q9Y2P8 373 aaKnown RBP8.03□□□□□ -1.12
SPG11-216ENST00000559347 A6NHS1 94 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 PMS2P5A8MQ11 134 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 CCSO14618 274 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 PAX9P55771 341 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 AKR1C1Q04828 323 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 OR2F1Q13607 317 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 PSMG4Q5JS54 123 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 STHQ8IWL8 128 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 PSENENQ9NZ42 101 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 PTTG2Q9NZH5 202 aa8.02□□□□□ -1.13
SPG11-216ENST00000559347 LCE6AA0A183 80 aa8.01□□□□□ -1.13
SPG11-216ENST00000559347 KNCNA6PVL3 124 aa8.01□□□□□ -1.13
SPG11-216ENST00000559347 SNRPGP15A8MWD9 76 aa8.01□□□□□ -1.13
SPG11-216ENST00000559347 CCNKO75909 580 aa8.01□□□□□ -1.13
SPG11-216ENST00000559347 C4BPBP20851 252 aa8.01□□□□□ -1.13
SPG11-216ENST00000559347 ASAH1Q13510 395 aa8.01□□□□□ -1.13
SPG11-216ENST00000559347 TMEM14EPQ6UXP3 125 aa8.01□□□□□ -1.13
SPG11-216ENST00000559347 ZNF431Q8TF32 576 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms