RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 POLR2GP62487 172 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPL28-207ENST00000558815 RPP30P78346 268 aaKnown RBP11.29□□□□□ -0.6
RPL28-207ENST00000558815 ZNF90Q03938 601 aa11.29□□□□□ -0.6
RPL28-207ENST00000558815 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
RPL28-207ENST00000558815 Q6ZWC4 215 aa11.29□□□□□ -0.6
RPL28-207ENST00000558815 KIR2DL5AQ8N109 375 aa11.29□□□□□ -0.6
RPL28-207ENST00000558815 KIR2DL5BQ8NHK3 375 aa11.29□□□□□ -0.6
RPL28-207ENST00000558815 U3KQE9 123 aa11.29□□□□□ -0.6
RPL28-207ENST00000558815 IGKV1D-37A0A075B6S9 117 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 TRAV6A0A075B6T7 132 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 TRAV2A0A0B4J234 112 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 HELTA6NFD8 242 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 K7EQG2 157 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 SSSCA1O60232 199 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 GLMPQ8WWB7 406 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 CSTL1Q9H114 145 aa11.28□□□□□ -0.6
RPL28-207ENST00000558815 STARD9Q9P2P6 4700 aa11.27□□□□□ -0.61
RPL28-207ENST00000558815 A0A0J9YWU9 116 aa11.27□□□□□ -0.61
RPL28-207ENST00000558815 NKX2-1P43699 371 aaPredicted RBP11.27□□□□□ -0.61
RPL28-207ENST00000558815 IAH1Q2TAA2 248 aaPredicted RBP11.27□□□□□ -0.61
RPL28-207ENST00000558815 STHQ8IWL8 128 aa11.27□□□□□ -0.61
RPL28-207ENST00000558815 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
RPL28-207ENST00000558815 PSENENQ9NZ42 101 aa11.27□□□□□ -0.61
RPL28-207ENST00000558815 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.61
RPL28-207ENST00000558815 STRAPQ9Y3F4 350 aaKnown RBP11.27□□□□□ -0.61
RPL28-207ENST00000558815 SMCO3A2RU48 225 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 CA1P00915 261 aaPredicted RBP11.26□□□□□ -0.61
RPL28-207ENST00000558815 FABP1P07148 127 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 ID3Q02535 119 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 AKR1C1Q04828 323 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 CNPY1Q3B7I2 92 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 OR4D5Q8NGN0 318 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 IL17DQ8TAD2 202 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 RNF183Q96D59 192 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 GSKIPQ9P0R6 139 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 RYR3Q15413 4870 aa11.26□□□□□ -0.61
RPL28-207ENST00000558815 CCSO14618 274 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 BUB3O43684 328 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 TCRBP04435 133 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 AP2S1P53680 142 aaPredicted RBP11.25□□□□□ -0.61
RPL28-207ENST00000558815 PMS2P11Q13670 270 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 PSMG4Q5JS54 123 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 OR8G2PQ6IF36 304 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 SIGLEC15Q6ZMC9 328 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 ACOT7LQ6ZUV0 252 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 MITD1Q8WV92 249 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 TRGV9Q99603 122 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 CCDC32Q9BV29 185 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 NUDT15Q9NV35 164 aa11.25□□□□□ -0.61
RPL28-207ENST00000558815 DYNC2H1Q8NCM8 4307 aaKnown RBP11.24□□□□□ -0.61
RPL28-207ENST00000558815 IGKV1OR2-108A0A075B7D4 117 aa11.24□□□□□ -0.61
RPL28-207ENST00000558815 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
RPL28-207ENST00000558815 PRSS46E5RG02 174 aa11.24□□□□□ -0.61
RPL28-207ENST00000558815 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
RPL28-207ENST00000558815 THAP8Q8NA92 274 aa11.24□□□□□ -0.61
RPL28-207ENST00000558815 ZBTB8BQ8NAP8 495 aaPredicted RBP11.24□□□□□ -0.61
RPL28-207ENST00000558815 SEC22CQ9BRL7 303 aa11.24□□□□□ -0.61
RPL28-207ENST00000558815 PFDN2Q9UHV9 154 aa11.24□□□□□ -0.61
RPL28-207ENST00000558815 CSMD3Q7Z407 3707 aa11.23□□□□□ -0.61
RPL28-207ENST00000558815 FAM240BA0A1B0GVZ2 78 aa11.23□□□□□ -0.61
RPL28-207ENST00000558815 FAM25EA8MYX2 175 aa11.23□□□□□ -0.61
RPL28-207ENST00000558815 CCNKO75909 580 aa11.23□□□□□ -0.61
RPL28-207ENST00000558815 GATA2P23769 480 aaPredicted RBP11.23□□□□□ -0.61
RPL28-207ENST00000558815 NUP62P37198 522 aaPredicted RBP11.23□□□□□ -0.61
RPL28-207ENST00000558815 RRAS2P62070 204 aaPredicted RBP11.23□□□□□ -0.61
RPL28-207ENST00000558815 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPL28-207ENST00000558815 GSG1LQ6UXU4 331 aa11.23□□□□□ -0.61
RPL28-207ENST00000558815 S100ZQ8WXG8 99 aa11.23□□□□□ -0.61
RPL28-207ENST00000558815 NRN1Q9NPD7 142 aa11.23□□□□□ -0.61
RPL28-207ENST00000558815 AGRNO00468 2067 aa11.23□□□□□ -0.61
RPL28-207ENST00000558815 CXorf65A6NEN9 183 aa11.22□□□□□ -0.61
RPL28-207ENST00000558815 METTL15P1P0C7V9 234 aa11.22□□□□□ -0.61
RPL28-207ENST00000558815 ZNF846Q147U1 533 aa11.22□□□□□ -0.61
RPL28-207ENST00000558815 OR11H2Q8NH07 326 aa11.22□□□□□ -0.61
RPL28-207ENST00000558815 SMIM8Q96KF7 97 aa11.22□□□□□ -0.61
RPL28-207ENST00000558815 RARRES2Q99969 163 aa11.22□□□□□ -0.61
RPL28-207ENST00000558815 A6NHS1 94 aa11.21□□□□□ -0.61
RPL28-207ENST00000558815 H2AFB2P0C5Z0 115 aa11.21□□□□□ -0.61
RPL28-207ENST00000558815 ORM2P19652 201 aa11.21□□□□□ -0.61
RPL28-207ENST00000558815 PAX9P55771 341 aa11.21□□□□□ -0.61
RPL28-207ENST00000558815 SNRPD3P62318 126 aaKnown RBP11.21□□□□□ -0.61
RPL28-207ENST00000558815 MZT2BQ6NZ67 158 aa11.21□□□□□ -0.61
RPL28-207ENST00000558815 TRPT1Q86TN4 253 aaKnown RBP11.21□□□□□ -0.61
RPL28-207ENST00000558815 BPIFCQ8NFQ6 507 aa11.21□□□□□ -0.61
RPL28-207ENST00000558815 ZNF431Q8TF32 576 aaPredicted RBP11.21□□□□□ -0.61
RPL28-207ENST00000558815 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.61
RPL28-207ENST00000558815 SLC25A22Q9H936 323 aa11.21□□□□□ -0.61
RPL28-207ENST00000558815 RCL1Q9Y2P8 373 aaKnown RBP11.21□□□□□ -0.61
RPL28-207ENST00000558815 LSM5Q9Y4Y9 91 aaKnown RBP11.21□□□□□ -0.61
RPL28-207ENST00000558815 SACSQ9NZJ4 4579 aa11.2□□□□□ -0.62
RPL28-207ENST00000558815 LCE6AA0A183 80 aa11.2□□□□□ -0.62
RPL28-207ENST00000558815 C5orf51A6NDU8 294 aa11.2□□□□□ -0.62
RPL28-207ENST00000558815 MBPP02686 304 aaPredicted RBP11.2□□□□□ -0.62
RPL28-207ENST00000558815 TMEM182Q6ZP80 229 aaPredicted RBP11.2□□□□□ -0.62
RPL28-207ENST00000558815 LINC00299Q6ZSB3 139 aa11.2□□□□□ -0.62
RPL28-207ENST00000558815 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
RPL28-207ENST00000558815 OR1B1Q8NGR6 318 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms