RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 TMEM41BQ5BJD5 291 aa11.49□□□□□ -0.57
VPS18-202ENST00000558474 FFAR4Q5NUL3 377 aa11.49□□□□□ -0.57
VPS18-202ENST00000558474 ALKAL2Q6UX46 152 aa11.49□□□□□ -0.57
VPS18-202ENST00000558474 LCNL1Q6ZST4 164 aa11.49□□□□□ -0.57
VPS18-202ENST00000558474 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.49□□□□□ -0.57
VPS18-202ENST00000558474 GATAD1Q8WUU5 269 aa11.49□□□□□ -0.57
VPS18-202ENST00000558474 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
VPS18-202ENST00000558474 WI2-2373I1.2A0A1W2PRP0 233 aa11.48□□□□□ -0.57
VPS18-202ENST00000558474 I3L521 148 aa11.48□□□□□ -0.57
VPS18-202ENST00000558474 NDUFA4O00483 81 aa11.48□□□□□ -0.57
VPS18-202ENST00000558474 IGHV3-11P01762 117 aa11.48□□□□□ -0.57
VPS18-202ENST00000558474 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
VPS18-202ENST00000558474 TMEM182Q6ZP80 229 aaPredicted RBP11.48□□□□□ -0.57
VPS18-202ENST00000558474 GNB4Q9HAV0 340 aa11.48□□□□□ -0.57
VPS18-202ENST00000558474 RNF24Q9Y225 148 aa11.48□□□□□ -0.57
VPS18-202ENST00000558474 HAX1O00165 279 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 YIF1AO95070 293 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 CD28P10747 220 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 SRSF2Q01130 221 aaKnown RBP11.47□□□□□ -0.57
VPS18-202ENST00000558474 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 OR10G9Q8NGN4 311 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 OR10G7Q8NGN6 311 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 SAT2Q96F10 170 aaPredicted RBP11.47□□□□□ -0.57
VPS18-202ENST00000558474 DNAJC4Q9NNZ3 241 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 NF1P21359 2839 aa11.47□□□□□ -0.57
VPS18-202ENST00000558474 BMPR1BO00238 502 aa11.46□□□□□ -0.57
VPS18-202ENST00000558474 HYPMO75409 117 aa11.46□□□□□ -0.57
VPS18-202ENST00000558474 ZP3P21754 424 aa11.46□□□□□ -0.57
VPS18-202ENST00000558474 GATA2P23769 480 aaPredicted RBP11.46□□□□□ -0.57
VPS18-202ENST00000558474 ELLP55199 621 aaPredicted RBP11.46□□□□□ -0.57
VPS18-202ENST00000558474 RHOBP62745 196 aa11.46□□□□□ -0.57
VPS18-202ENST00000558474 BLOC1S1P78537 153 aa11.46□□□□□ -0.57
VPS18-202ENST00000558474 RNF125Q96EQ8 232 aa11.46□□□□□ -0.57
VPS18-202ENST00000558474 MRPL32Q9BYC8 188 aaKnown RBP11.46□□□□□ -0.57
VPS18-202ENST00000558474 RPRMQ9NS64 109 aa11.46□□□□□ -0.57
VPS18-202ENST00000558474 ANKRD34BA5PLL1 514 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 SEC14L6B5MCN3 397 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 PPP5D1E7EU14 171 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 IL4P05112 153 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 OR5G3P0C626 314 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 FAM106AQ4KMX7 169 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 C10orf113Q5VZT2 155 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 PRIMA1Q86XR5 153 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 ACTR3CQ9C0K3 210 aaPredicted RBP11.45□□□□□ -0.58
VPS18-202ENST00000558474 ZFAND3Q9H8U3 227 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 PLA2G2EQ9NZK7 142 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 MRPL27Q9P0M9 148 aaKnown RBP11.45□□□□□ -0.58
VPS18-202ENST00000558474 PFDN2Q9UHV9 154 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 PUS1Q9Y606 427 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS18-202ENST00000558474 RFNGQ9Y644 331 aa11.45□□□□□ -0.58
VPS18-202ENST00000558474 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 A0A1W2PPV4 95 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 TRBV12-3P01733 135 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 RAB14P61106 215 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 LYZP61626 148 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 RPEL1Q2QD12 228 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 AWAT1Q58HT5 328 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 KHDC1LQ5JSQ8 128 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 NDUFA11Q86Y39 141 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 RPP25LQ8N5L8 163 aaKnown RBP11.44□□□□□ -0.58
VPS18-202ENST00000558474 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 TMEM37Q8WXS4 190 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 ZNF414Q96IQ9 312 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 CITED2Q99967 270 aaPredicted RBP11.44□□□□□ -0.58
VPS18-202ENST00000558474 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
VPS18-202ENST00000558474 NIPBLQ6KC79 2804 aaeCLIP11.44□□□□□ -0.58
VPS18-202ENST00000558474 ZNF705EA8MWA4 302 aaPredicted RBP11.43□□□□□ -0.58
VPS18-202ENST00000558474 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 LINC01619G3V211 115 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 TEX46H3BTG2 121 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 K7EMT4 169 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 LGALS9O00182 355 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 ORM2P19652 201 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 CDC34P49427 236 aaPredicted RBP11.43□□□□□ -0.58
VPS18-202ENST00000558474 RAB2AP61019 212 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 KRTAP24-1Q3LI83 254 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 FAM74A1Q5RGS3 127 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 PATE2Q6UY27 113 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 REC114Q7Z4M0 266 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 OR1B1Q8NGR6 318 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 MBD3L1Q8WWY6 194 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 TMEM190Q8WZ59 177 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 TMEM158Q8WZ71 300 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 OR5B12Q96R08 314 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 RABAC1Q9UI14 185 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 FUT9Q9Y231 359 aa11.43□□□□□ -0.58
VPS18-202ENST00000558474 IGHV4OR15-8A0A075B7B6 117 aa11.42□□□□□ -0.58
VPS18-202ENST00000558474 A0A087WW49 117 aa11.42□□□□□ -0.58
VPS18-202ENST00000558474 HBE1P02100 147 aa11.42□□□□□ -0.58
VPS18-202ENST00000558474 TAS2R45P59539 299 aa11.42□□□□□ -0.58
VPS18-202ENST00000558474 USF2Q15853 346 aaPredicted RBP11.42□□□□□ -0.58
VPS18-202ENST00000558474 CLLU1Q5K131 121 aa11.42□□□□□ -0.58
VPS18-202ENST00000558474 FAM78BQ5VT40 261 aa11.42□□□□□ -0.58
VPS18-202ENST00000558474 STXBP6Q8NFX7 210 aa11.42□□□□□ -0.58
VPS18-202ENST00000558474 OR11H1Q8NG94 326 aa11.42□□□□□ -0.58
VPS18-202ENST00000558474 OR1N2Q8NGR9 330 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms