RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 IGHV1-8P0DP01 117 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 CFHR2P36980 270 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 COL5A1-AS1Q5SY13 56 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 FAM169BQ8N8A8 192 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 OR4A5Q8NH83 315 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 GNB1LQ9BYB4 327 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 TPSG1Q9NRR2 321 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 HBBP68871 147 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 MAP1LC3CQ9BXW4 147 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 CLEC5AQ9NY25 188 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 UQCR10Q9UDW1 63 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 HCFC1P51610 2035 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 PMCHL1Q16048 86 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 LCN12Q6JVE5 192 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 TMEM167AQ8TBQ9 72 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 CDC42EP3Q9UKI2 254 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 IGLV3-9A0A075B6K5 115 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 TCF21O43680 179 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 TFPI2P48307 235 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 TRAV9-1A0A075B6T8 112 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 A8MWP6 167 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 CNTFRP26992 372 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 KCNS1Q96KK3 526 aa12.55□□□□□ -0.4
AP4E1-202ENST00000558439 COL5A1P20908 1838 aaPredicted RBP12.54□□□□□ -0.4
AP4E1-202ENST00000558439 CBY3A6NI87 242 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 WT1-ASQ06250 92 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 VWC2Q2TAL6 325 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 GOLT1BQ9Y3E0 138 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 MYO15AQ9UKN7 3530 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 A0A1W2PPI3 338 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 K7EN84 100 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 EREGO14944 169 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 NUPR1O60356 82 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 ZNF324O75467 553 aaPredicted RBP12.54□□□□□ -0.4
AP4E1-202ENST00000558439 PMCHL2Q9BQD1 86 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 FAM208BQ5VWN6 2430 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 A6NNC1 897 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 TIMM23O14925 209 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 CDKN1AP38936 164 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 SCGB2A2Q13296 93 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 PPP1R14DQ9NXH3 145 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 DPM3Q9P2X0 92 aa12.54□□□□□ -0.4
AP4E1-202ENST00000558439 F2Z2F3 143 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 OR2J3O76001 311 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 CX3CL1P78423 397 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 SSBP2P81877 361 aaPredicted RBP12.53□□□□□ -0.4
AP4E1-202ENST00000558439 RPP21Q9H633 154 aaKnown RBP12.53□□□□□ -0.4
AP4E1-202ENST00000558439 RNF24Q9Y225 148 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 LOC105371242A0A075B767 164 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 IGHV2-26A0A0B4J1V2 119 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 TYMSP04818 313 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 GATA4P43694 442 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 PSG1P11464 419 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 TANC2Q9HCD6 1990 aa12.53□□□□□ -0.4
AP4E1-202ENST00000558439 PIP4P1Q86T03 277 aa12.52□□□□□ -0.4
AP4E1-202ENST00000558439 SPACA3Q8IXA5 215 aa12.52□□□□□ -0.4
AP4E1-202ENST00000558439 PYGO2Q9BRQ0 406 aa12.52□□□□□ -0.4
AP4E1-202ENST00000558439 MIEN1Q9BRT3 115 aa12.52□□□□□ -0.4
AP4E1-202ENST00000558439 M0QZ24 198 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 FRMD6-AS1P0C7T7 363 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 P0C879 139 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 FOSL1P15407 271 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.41
AP4E1-202ENST00000558439 LSM4Q9Y4Z0 139 aaKnown RBP12.52□□□□□ -0.41
AP4E1-202ENST00000558439 ACACBO00763 2458 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 IGHV3-66A0A0C4DH42 116 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 E7EQL1 145 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 MFAP4P55083 255 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 C1orf194Q5T5A4 169 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 OR4C5Q8NGB2 326 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 NDUFA4L2Q9NRX3 87 aa12.52□□□□□ -0.41
AP4E1-202ENST00000558439 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 ITGB1BP1O14713 200 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 FCER1GP30273 86 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 PRR20EP86478 221 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 PRR20CP86479 221 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 PRR20DP86480 221 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 PRR20BP86481 221 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 PRR20AP86496 221 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 C1orf229Q6ZS94 237 aaPredicted RBP12.51□□□□□ -0.41
AP4E1-202ENST00000558439 CIARTQ8N365 385 aaPredicted RBP12.51□□□□□ -0.41
AP4E1-202ENST00000558439 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 DOPEY2Q9Y3R5 2298 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 BMPR1BO00238 502 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 C22orf34Q6ZV56 151 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 NUP35Q8NFH5 326 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 UFC1Q9Y3C8 167 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 IGHV3OR16-10A0A075B7F0 116 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 SIAH2O43255 324 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 SNAI2O43623 268 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 TEX45Q8NA69 505 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 NUP37Q8NFH4 326 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 FNDC4Q9H6D8 234 aaPredicted RBP12.51□□□□□ -0.41
AP4E1-202ENST00000558439 V9GYV3 84 aa12.51□□□□□ -0.41
AP4E1-202ENST00000558439 KIAA1549Q9HCM3 1950 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 LHBP01229 141 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms