RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 PLGLAQ15195 96 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 PATE2Q6UY27 113 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 S100A7AQ86SG5 101 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 LY6G5BQ8NDX9 201 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 OR1B1Q8NGR6 318 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 FANCD2OSQ96PS1 177 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 ONECUT1Q9UBC0 465 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 ZNF292O60281 2723 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 ARFGEF3Q5TH69 2177 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 TRAV5A0A0B4J249 113 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 IZUMO1RA6ND01 250 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 ZNF705GA8MUZ8 300 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-206ENST00000558338 TEX22C9J3V5 150 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 LY6LH3BQJ8 138 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 MOSP00540 346 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 IGLV2-8P01709 118 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 PYYP10082 97 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 HIST1H1EP10412 219 aaKnown RBP5.81□□□□□ -1.48
VPS13C-206ENST00000558338 HTR1DP28221 377 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 DDTP30046 118 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 IER3P46695 156 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 USF2Q15853 346 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-206ENST00000558338 TMEM183BQ1AE95 376 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 OR10J3Q5JRS4 329 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 TPTE2P1Q5T6R2 138 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 MORN5Q5VZ52 161 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 HCP5Q6MZN7 132 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 CDPF1Q6NVV7 123 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 OR11H6Q8NGC7 330 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 SRSF12Q8WXF0 261 aaKnown RBP5.81□□□□□ -1.48
VPS13C-206ENST00000558338 GRAMD2BQ96HH9 432 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 FMC1Q96HJ9 113 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 RITA1Q96K30 269 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 RNASE7Q9H1E1 156 aaKnown RBP5.81□□□□□ -1.48
VPS13C-206ENST00000558338 RNF24Q9Y225 148 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 HIGD1AQ9Y241 93 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 ZFHX4Q86UP3 3567 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 C22orf46C9J442 243 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 SLC25A5P05141 298 aaKnown RBP5.8□□□□□ -1.48
VPS13C-206ENST00000558338 PAX1P15863 534 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 ORM2P19652 201 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 MYCNOSP40205 109 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 BAGE2Q86Y30 109 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 KIR3DL3Q8N743 410 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 C5orf17Q8NAS9 161 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 WIPF2Q8TF74 440 aaPredicted RBP5.8□□□□□ -1.48
VPS13C-206ENST00000558338 MS4A10Q96PG2 267 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 RASL11BQ9BPW5 248 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 ATG101Q9BSB4 218 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 ZNF331Q9NQX6 463 aaPredicted RBP5.8□□□□□ -1.48
VPS13C-206ENST00000558338 SERTAD4Q9NUC0 356 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 MRPL36Q9P0J6 103 aaKnown RBP5.8□□□□□ -1.48
VPS13C-206ENST00000558338 TMEM14CQ9P0S9 112 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 DPM3Q9P2X0 92 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 NAT8BQ9UHF3 227 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 EPDR1Q9UM22 224 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 ICE1Q9Y2F5 2266 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 TNCP24821 2201 aa5.8□□□□□ -1.48
VPS13C-206ENST00000558338 PRRC2CQ9Y520 2896 aaKnown RBP5.8□□□□□ -1.48
VPS13C-206ENST00000558338 OOSP1A8MZH6 123 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 LYNX1G3V0Z9 82 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 NBR2O15453 112 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 SCGB2A1O75556 95 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 NBEAP1P0C6P0 100 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 RD3LP0DJH9 198 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 LYNX1P0DP58 116 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 GP9P14770 177 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 CNTFRP26992 372 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 GPR6P46095 362 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-206ENST00000558338 MFAP2P55001 183 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 ADORA2A-AS1P86434 159 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 FXYD3Q14802 87 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 LBHQ53QV2 105 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-206ENST00000558338 DGAT2L7PQ6IED9 249 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 CCDC144NLQ6NUI1 221 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 TMEM136Q6ZRR5 245 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 ATP5L2Q7Z4Y8 100 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 BAGE3Q86Y29 109 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 SSBP3Q9BWW4 388 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-206ENST00000558338 FBXL15Q9H469 300 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 KLF12Q9Y4X4 402 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 DMXL1Q9Y485 3027 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 LOC105371242A0A075B767 164 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 TRAV30A0A087WSZ9 112 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 A8MZ25 164 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 TIMM23O14925 209 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 EIF4EBP3O60516 100 aaPredicted RBP5.79□□□□□ -1.48
VPS13C-206ENST00000558338 NDUFA3O95167 84 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 CNIH1O95406 144 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 IGLC1P0CG04 106 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 BRS3P32247 399 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 RAB4BP61018 213 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 RPL11P62913 178 aaKnown RBP5.79□□□□□ -1.48
VPS13C-206ENST00000558338 MMDQ15546 238 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 C11orf71Q6IPW1 123 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 RBPMS2Q6ZRY4 209 aaKnown RBP5.79□□□□□ -1.48
VPS13C-206ENST00000558338 TMEM256Q8N2U0 113 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 NPBQ8NG41 125 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 TMEM68Q96MH6 324 aa5.79□□□□□ -1.48
VPS13C-206ENST00000558338 GPR82Q96P67 336 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms