RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TMEM116Q8NCL8 245 aa8.37□□□□□ -1.07
TPM1-210ENST00000558264 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
TPM1-210ENST00000558264 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
TPM1-210ENST00000558264 IGHV3OR16-10A0A075B7F0 116 aa8.37□□□□□ -1.07
TPM1-210ENST00000558264 A0A1W2PRE2 83 aa8.37□□□□□ -1.07
TPM1-210ENST00000558264 A6NNC1 897 aa8.37□□□□□ -1.07
TPM1-210ENST00000558264 PYY3Q5JQD4 70 aa8.37□□□□□ -1.07
TPM1-210ENST00000558264 SH2D7A6NKC9 451 aaPredicted RBP8.36□□□□□ -1.07
TPM1-210ENST00000558264 C9JCJ5 164 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 I3L2K1 104 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 IGLC1P0CG04 106 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 CD99P14209 185 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 CBLN1P23435 193 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 EFNA4P52798 201 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 FAM120AOSQ5T036 256 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 PRR27Q6MZM9 219 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 ZNF329Q86UD4 541 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 TRGV9Q99603 122 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 SERTAD4Q9NUC0 356 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 TRAPPC1Q9Y5R8 145 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 ISLRO14498 428 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 HYPMO75409 117 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 IGLV2-8P01709 118 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 CX3CL1P78423 397 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 C5orf64Q2M2E5 130 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 PVRIGQ6DKI7 326 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 OR8I2Q8N0Y5 310 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 PERPQ96FX8 193 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 RBM14Q96PK6 669 aaKnown RBP8.36□□□□□ -1.07
TPM1-210ENST00000558264 RASL11BQ9BPW5 248 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 K7EIM0 57 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 TGOLN2O43493 480 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 RNF224P0DH78 156 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 FOSL1P15407 271 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 BCL6BQ8N143 479 aaPredicted RBP8.36□□□□□ -1.07
TPM1-210ENST00000558264 RNF2Q99496 336 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 TCEAL7Q9BRU2 100 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 V9GYV3 84 aa8.36□□□□□ -1.07
TPM1-210ENST00000558264 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
TPM1-210ENST00000558264 PGPA6NDG6 321 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 CORTO00230 105 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 SLC25A5P05141 298 aaKnown RBP8.35□□□□□ -1.07
TPM1-210ENST00000558264 PRR31Q5SQ13 230 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 IGF2BP2-AS1Q96M15 143 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 SIRPDQ9H106 197 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 IL36BQ9NZH7 164 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 USP9XQ93008 2570 aaPredicted RBP8.35□□□□□ -1.07
TPM1-210ENST00000558264 GRIFINA4D1Z8 144 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 PEX7O00628 323 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 TMEM11P17152 192 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 RPL15P61313 204 aaKnown RBP8.35□□□□□ -1.07
TPM1-210ENST00000558264 FOXL1Q12952 345 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 TBX15Q96SF7 602 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 HIST1H2BLQ99880 126 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 ASCL2Q99929 193 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 ARL2-SNX15V9GYD0 113 aa8.35□□□□□ -1.07
TPM1-210ENST00000558264 IGHV3OR16-8A0A075B7F1 116 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 NDUFA3O95167 84 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 IGHV4-39P01824 125 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 TYMSP04818 313 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 NBEAP1P0C6P0 100 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 Q71RC1 249 aaPredicted RBP8.34□□□□□ -1.07
TPM1-210ENST00000558264 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 FAM168AQ92567 244 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 RNF5Q99942 180 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 PITPNC1Q9UKF7 332 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 HIGD1AQ9Y241 93 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 IGHV3-35A0A0C4DH35 117 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 PRB1P04280 392 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 HIST1H1BP16401 226 aaKnown RBP8.34□□□□□ -1.07
TPM1-210ENST00000558264 ADMP35318 185 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 SAA4P35542 130 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 IER3P46695 156 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 CNN1P51911 297 aaKnown RBP8.34□□□□□ -1.07
TPM1-210ENST00000558264 LMO4P61968 165 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 PAX2Q02962 417 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 RPEL1Q2QD12 228 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 IBA57Q5T440 356 aaKnown RBP8.34□□□□□ -1.07
TPM1-210ENST00000558264 NPBQ8NG41 125 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 ARPC1AQ92747 370 aa8.34□□□□□ -1.07
TPM1-210ENST00000558264 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
TPM1-210ENST00000558264 GP9P14770 177 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 ZNF600Q6ZNG1 722 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 BAGE2Q86Y30 109 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 TMEM183AQ8IXX5 376 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 EXOC3-AS1Q8N2X6 119 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 OR1L6Q8NGR2 347 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 C17orf77Q96MU5 243 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 SLC25A39Q9BZJ4 359 aaPredicted RBP8.33□□□□□ -1.08
TPM1-210ENST00000558264 CELSR2Q9HCU4 2923 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 OR2J3O76001 311 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 MRPL54Q6P161 138 aaKnown RBP8.33□□□□□ -1.08
TPM1-210ENST00000558264 GSN-AS1Q9NRJ2 163 aa8.33□□□□□ -1.08
TPM1-210ENST00000558264 MYO18BQ8IUG5 2567 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 TRAV8-1A0A0A6YYK1 113 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 ZNF705GA8MUZ8 300 aaPredicted RBP8.32□□□□□ -1.08
TPM1-210ENST00000558264 GCGP01275 180 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms