RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 UBE2DNLQ8IWF7 75 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 OR51S1Q8NGJ8 323 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 THEM6Q8WUY1 208 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 TMEM203Q969S6 136 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 FGGYQ96C11 551 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 GPX7Q96SL4 187 aaPredicted RBP3.76□□□□□ -1.81
RTF1-204ENST00000558117 AMELYQ99218 206 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 NICN1Q9BSH3 213 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 TLNRD1Q9H1K6 362 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 ERGIC3Q9Y282 383 aa3.76□□□□□ -1.81
RTF1-204ENST00000558117 NACAE9PAV3 2078 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 NBDYA0A0U1RRE5 68 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 LEUTXA8MZ59 168 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 J3QRE1 110 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 MYL12BO14950 172 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 DEFB4AO15263 64 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 RPP14O95059 124 aaKnown RBP3.75□□□□□ -1.81
RTF1-204ENST00000558117 PTTG1O95997 202 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 IGLV1-47P01700 117 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 OR5H8P0DN80 308 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 PSG2P11465 335 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 PIPP12273 146 aaPredicted RBP3.75□□□□□ -1.81
RTF1-204ENST00000558117 CD36P16671 472 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 MYL12AP19105 171 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 GADD45AP24522 165 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 HLA-DMBP28068 263 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 RAB7AP51149 207 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 OR10A3P58181 314 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 ACTBP60709 375 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 RAP1AP62834 184 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 INSL4Q14641 139 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 PRR4Q16378 134 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 LINC01590Q5TEZ4 76 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 ZNF322Q6U7Q0 402 aaPredicted RBP3.75□□□□□ -1.81
RTF1-204ENST00000558117 Q6ZVH6 145 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 ACBD7Q8N6N7 88 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 Q8N9W7 124 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 LFNGQ8NES3 379 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 OR10W1Q8NGF6 305 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 OR10Z1Q8NGY1 313 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 OR2T4Q8NH00 348 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 RNF133Q8WVZ7 376 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 TMEM230Q96A57 120 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 PPP1R14BQ96C90 147 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 YIPF6Q96EC8 236 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 ZNF488Q96MN9 340 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 RBP7Q96R05 134 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 MGLLQ99685 303 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 KIR2DL4Q99706 377 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 RASL11BQ9BPW5 248 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 HSPB9Q9BQS6 159 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 SCRT1Q9BWW7 348 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 YIPF3Q9GZM5 350 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 OR51E2Q9H255 320 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 TMEM133Q9H2Q1 129 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 BATF3Q9NR55 127 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 GNG8Q9UK08 70 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 LSM2Q9Y333 95 aaKnown RBP3.75□□□□□ -1.81
RTF1-204ENST00000558117 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
RTF1-204ENST00000558117 IGHV7-81A0A0B4J1V7 117 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 TRAV39A0A0B4J263 110 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 A0A0B4J2A0 478 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 ZNF670-ZNF695F2Z2N8 137 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 G3V318 75 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 ORM1P02763 201 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 OR5AL1P0C617 328 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 KRTAP10-4P60372 401 aaPredicted RBP3.74□□□□□ -1.81
RTF1-204ENST00000558117 VBP1P61758 197 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 B2MP61769 119 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 SELENOTP62341 195 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 RPS25P62851 125 aaKnown RBP3.74□□□□□ -1.81
RTF1-204ENST00000558117 RAB31Q13636 194 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 SPCS2Q15005 226 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 SSX1Q16384 188 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 TCF23Q7RTU1 214 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 YIPF7Q8N8F6 280 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 NKAPP1Q8N9T2 125 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 OR51E1Q8TCB6 317 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 DGCR14Q96DF8 476 aaKnown RBP3.74□□□□□ -1.81
RTF1-204ENST00000558117 MND1Q9BWT6 205 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 EXOSC4Q9NPD3 245 aaKnown RBP3.74□□□□□ -1.81
RTF1-204ENST00000558117 BABAM2Q9NXR7 383 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 SHPKQ9UHJ6 478 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 ATPIF1Q9UII2 106 aa3.74□□□□□ -1.81
RTF1-204ENST00000558117 SMIM31A0A1B0GVY4 71 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 IRGMA1A4Y4 181 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 METTL15A6NJ78 407 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 OOSP1A8MZH6 123 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 RER1O15258 196 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 MRPS14O60783 128 aaKnown RBP3.73□□□□□ -1.81
RTF1-204ENST00000558117 MMP23AO75900 390 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 IGHV3-11P01762 117 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 CTXN2P0C2S0 81 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 OCM2P0CE71 109 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 CELP19835 753 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 CRABP1P29762 137 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 GALR1P47211 349 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 WNT4P56705 351 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 NCS1P62166 190 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms