RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MRPL36Q9P0J6 103 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 NCOR1O75376 2440 aa9.52□□□□□ -0.89
VIPAS39-211ENST00000557658 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 NBEAP1P0C6P0 100 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 LRRC10Q5BKY1 277 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 ETFRF1Q6IPR1 90 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 ZNF474Q6S9Z5 364 aaPredicted RBP9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 C5orf17Q8NAS9 161 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 ST6GALNAC6Q969X2 333 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 PGLYRP4Q96LB8 373 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 DSPP15924 2871 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 PLA2G2CQ5R387 149 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 RBPMS2Q6ZRY4 209 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 OR10X1Q8NGY0 326 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 GFRA4Q9GZZ7 299 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 TMEM191AQ9H0A3 160 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 PLCE1Q9P212 2302 aa9.51□□□□□ -0.89
VIPAS39-211ENST00000557658 ARFGEF3Q5TH69 2177 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 LOC105371242A0A075B767 164 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 HSBP1L1C9JCN9 74 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 M0QZ24 198 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 LTAP01374 205 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 VAMP3Q15836 100 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 PRR31Q5SQ13 230 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 FAM71F2Q6NXP2 309 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 LINC00322Q6ZN03 302 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 GTSF1Q8WW33 167 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 WASHC3Q9Y3C0 194 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 TRAV30A0A087WSZ9 112 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 CHEK1O14757 476 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 OR5AL1P0C617 328 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 CCL3L1P16619 93 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 VMA21Q3ZAQ7 101 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 MPV17L2Q567V2 206 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 SLC25A34Q6PIV7 304 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 TMEM186Q96B77 213 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 LOXL4Q96JB6 756 aa9.5□□□□□ -0.89
VIPAS39-211ENST00000557658 A0A1W2PPI3 338 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 FAM231BA6NCW3 169 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 C22orf46C9J442 243 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 IGLV2-23P01705 113 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 TCRAP04437 139 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 LIPFP07098 398 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 SP9P0CG40 484 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 SRSF6Q13247 344 aaKnown RBP9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 TRGV9Q99603 122 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 NDFIP1Q9BT67 221 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 LOC102724200A0A096LPH7 203 aaPredicted RBP9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 hDV102S1A0JD36 115 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 CD24P25063 80 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 CDKN1BP46527 198 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 MAP1LC3CQ9BXW4 147 aa9.49□□□□□ -0.89
VIPAS39-211ENST00000557658 SLC25A17O43808 307 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 CRYGCP07315 174 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 TNFRSF1AP19438 455 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 ZNF137PP52743 207 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 TMEM200BQ69YZ2 307 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 Q9H3A6 140 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 ZNF835Q9Y2P0 537 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 NUDT3O95989 172 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 GP9P14770 177 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 DIAPH2-AS1Q14236 149 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 LINC00311Q8N616 119 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 WDFY4Q6ZS81 3184 aa9.48□□□□□ -0.89
VIPAS39-211ENST00000557658 CCL8P80075 99 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 SAPCD1Q5SSQ6 148 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 BVES-AS1Q5T3Y7 98 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 LHFPL4Q7Z7J7 247 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 GSX1Q9H4S2 264 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 TP73-AS1Q9UF72 201 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 TAX1BP3O14907 124 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 WT1P19544 449 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 COL8A1P27658 744 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 MC5RP33032 325 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 HCP5Q6MZN7 132 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 C8orf31Q8N9H6 132 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 H1FXQ92522 213 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 HSPB8Q9UJY1 196 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 PLXNB1O43157 2135 aa9.47□□□□□ -0.89
VIPAS39-211ENST00000557658 NPIPB6E9PJ23 425 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 HAX1O00165 279 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 FAM87AP0C7U9 286 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 CD40P25942 277 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 RHOGP84095 191 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 Q86TA4 180 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 C8orf46Q8TAG6 207 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 MS4A6AQ9H2W1 248 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 SCRT2Q9NQ03 307 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 TPSG1Q9NRR2 321 aa9.46□□□□□ -0.89
VIPAS39-211ENST00000557658 H3BTX0 84 aa9.46□□□□□ -0.9
VIPAS39-211ENST00000557658 LGALS7P47929 136 aa9.46□□□□□ -0.9
VIPAS39-211ENST00000557658 RPS20P60866 119 aaKnown RBP9.46□□□□□ -0.9
VIPAS39-211ENST00000557658 ANKRD39Q53RE8 183 aa9.46□□□□□ -0.9
VIPAS39-211ENST00000557658 RUSC1-AS1Q66K80 236 aa9.46□□□□□ -0.9
VIPAS39-211ENST00000557658 PVRIGQ6DKI7 326 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms