RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TCF24Q7RTU0 167 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 NRARPQ7Z6K4 114 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 ST8SIA2Q92186 375 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 GRAMD2BQ96HH9 432 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 U3KQK5 164 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 TGP01266 2768 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 IGHV3OR16-13A0A075B7E8 117 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 IGHV3-74A0A0B4J1X5 117 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 H3BP45 60 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 CCSO14618 274 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 IL4P05112 153 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
SLIRP-211ENST00000557623 EIF2B2P49770 351 aaKnown RBP9.34□□□□□ -0.91
SLIRP-211ENST00000557623 GSG1LQ6UXU4 331 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 Q8N3U1 123 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 DEFB125Q8N687 156 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 OR51G1Q8NGK1 321 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 C2orf50Q96LR7 162 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 TRGV9Q99603 122 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 PFDN2Q9UHV9 154 aa9.34□□□□□ -0.91
SLIRP-211ENST00000557623 LOC100996750A0A140TA64 210 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 SNRPGP15A8MWD9 76 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 PRSS46E5RG02 174 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 INMT-MINDY4F8WBC2 141 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 L7N2F9 121 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 TSC22D2O75157 780 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-211ENST00000557623 MBPP02686 304 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-211ENST00000557623 APOHP02749 345 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-211ENST00000557623 PSG1P11464 419 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 RPL11P62913 178 aaKnown RBP9.33□□□□□ -0.92
SLIRP-211ENST00000557623 VAMP2P63027 116 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 CDPF1Q6NVV7 123 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 THAP8Q8NA92 274 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 TM2D3Q9BRN9 247 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 KRTAP4-6Q9BYQ5 205 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 RABAC1Q9UI14 185 aa9.33□□□□□ -0.92
SLIRP-211ENST00000557623 IGKV3-7A0A075B6H7 116 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 IGKV1D-37A0A075B6S9 117 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 IGHV3-66A0A0C4DH42 116 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 DNASE2O00115 360 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-211ENST00000557623 DFFBO76075 338 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 PVALBP20472 110 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-211ENST00000557623 NUP62P37198 522 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-211ENST00000557623 P2RY1P47900 373 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 PAX9P55771 341 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 AKR1C1Q04828 323 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 HAGHQ16775 308 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 TMEM14EPQ6UXP3 125 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 LINC00322Q6ZN03 302 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-211ENST00000557623 OR10P1Q8NGE3 313 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 RNF125Q96EQ8 232 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 SPATA25Q9BR10 227 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 MARVELD1Q9BSK0 173 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 RCL1Q9Y2P8 373 aaKnown RBP9.32□□□□□ -0.92
SLIRP-211ENST00000557623 U3KQE9 123 aa9.32□□□□□ -0.92
SLIRP-211ENST00000557623 LOC102724200A0A096LPH7 203 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-211ENST00000557623 RBMY1BA6NDE4 496 aaKnown RBP9.31□□□□□ -0.92
SLIRP-211ENST00000557623 RBMY1EA6NEQ0 496 aaKnown RBP9.31□□□□□ -0.92
SLIRP-211ENST00000557623 HELTA6NFD8 242 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 PMS2P5A8MQ11 134 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 FNDC10F2Z333 226 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 K7EPK0 472 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 RBMY1DP0C7P1 496 aaKnown RBP9.31□□□□□ -0.92
SLIRP-211ENST00000557623 METTL15P1P0C7V9 234 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 TFPI2P48307 235 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 AP2S1P53680 142 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-211ENST00000557623 ZNF90Q03938 601 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 USF2Q15853 346 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-211ENST00000557623 OR8G2PQ6IF36 304 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 ACOT7LQ6ZUV0 252 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 TMEM144Q7Z5S9 345 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 LILRB2Q8N423 598 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 GBGT1Q8N5D6 347 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 MS4A6AQ9H2W1 248 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 UBQLN2Q9UHD9 624 aa9.31□□□□□ -0.92
SLIRP-211ENST00000557623 LSM5Q9Y4Y9 91 aaKnown RBP9.31□□□□□ -0.92
SLIRP-211ENST00000557623 C7orf66A4D0T2 115 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 S100A7P31151 101 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 DLK1P80370 383 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 ODF3L2Q3SX64 289 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 C16orf54Q6UWD8 224 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 WFDC3Q8IUB2 231 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 WWC2-AS2Q96NR7 200 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 RCHY1Q96PM5 261 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 PBDC1Q9BVG4 233 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 GGACTQ9BVM4 153 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 GGTLC1Q9BX51 225 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 MGAT4CQ9UBM8 478 aa9.3□□□□□ -0.92
SLIRP-211ENST00000557623 IGKV1OR2-108A0A075B7D4 117 aa9.29□□□□□ -0.92
SLIRP-211ENST00000557623 SMCO3A2RU48 225 aa9.29□□□□□ -0.92
SLIRP-211ENST00000557623 BUB3O43684 328 aa9.29□□□□□ -0.92
SLIRP-211ENST00000557623 BCAP31P51572 246 aa9.29□□□□□ -0.92
SLIRP-211ENST00000557623 S100A10P60903 97 aa9.29□□□□□ -0.92
SLIRP-211ENST00000557623 LYZP61626 148 aa9.29□□□□□ -0.92
SLIRP-211ENST00000557623 OR2F1Q13607 317 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms