RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ARRDC5A6NEK1 342 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 RBFOX3A6NFN3 312 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 ISLRO14498 428 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 PROSCO94903 275 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CXorf1O96002 111 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 IGKV5-2P06315 115 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SPINK8P0C7L1 97 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SFTA3P0C7M3 94 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SEC11BP0C7V7 166 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CRYGSP22914 178 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 COL8A2P25067 703 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 PRSS3P35030 304 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 GALR1P47211 349 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 GPM6AP51674 278 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 APOC4P55056 127 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 NDPQ00604 133 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 MYL5Q02045 173 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 ATP5G2Q06055 141 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 ERCC8Q13216 396 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SBSNQ6UWP8 590 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 Q6ZS49 121 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CLEC20AQ6ZU45 233 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 FP248Q71RG6 208 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SBSPONQ8IVN8 264 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 C1orf174Q8IYL3 243 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 FAM24BQ8N5W8 94 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 LINC00337Q8N6G1 96 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 DCAF4L2Q8NA75 395 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 LY6G5BQ8NDX9 201 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OR1J4Q8NGS1 313 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 PEBP4Q96S96 227 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 THTPAQ9BU02 230 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 PBDC1Q9BVG4 233 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SMIM3Q9BZL3 60 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CYSTM1Q9H1C7 97 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 EDA2RQ9HAV5 297 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 TVP23BQ9NYZ1 205 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 TAAR3PQ9P1P4 343 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 COL27A1Q8IZC6 1860 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 FER1L5A0AVI2 2057 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 LOC102724200A0A096LPH7 203 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TRBV7-6A0A0J9YX20 115 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 A0A0U1RQV1 116 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TRDV1A0A1B0GX56 115 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM262E9PQX1 116 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 LINC01619G3V211 115 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 SMKR1H3BMG3 65 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 PLPP1O14494 284 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 SS18L1O75177 396 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 NAPSAO96009 420 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 RBP4P02753 201 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TRGC2P03986 189 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 EIF4EP06730 217 aaKnown RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF286BP0CG31 522 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 FGF6P10767 208 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 HLA-DMBP28068 263 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF93P35789 620 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 VDAC2P45880 294 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 NUDT2P50583 147 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF136P52737 540 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 HLA-DRB3P79483 266 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 QRFPP83859 136 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 MEIG1Q5JSS6 88 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 BCL2L15Q5TBC7 163 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 MRPL54Q6P161 138 aaKnown RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TRIM40Q6P9F5 258 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 RASL11AQ6T310 242 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 Q8N2B8 174 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 OR5D16Q8NGK9 328 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 OR51E1Q8TCB6 317 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TBL1YQ9BQ87 522 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 MRPL45Q9BRJ2 306 aaKnown RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 BANF2Q9H503 90 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 CYTL1Q9NRR1 136 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM106BQ9NUM4 274 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 FKBP11Q9NYL4 201 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 OR5V1Q9UGF6 321 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 DLEC1Q9Y238 1755 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 PKIGQ9Y2B9 76 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 KIAA1671Q9BY89 1806 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 TRGV10A0A0A0MS01 117 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 FAM236AA0A1B0GUQ0 79 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 FAM236BA0A1B0GV22 79 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 C5orf49A4QMS7 147 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 F8W1H4 67 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 H3BRM9 83 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 PEX7O00628 323 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 SOX14O95416 240 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 MMP7P09237 267 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 PGA4P0DJD7 388 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 PGA5P0DJD9 388 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 SLC25A4P12235 298 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 MDKP21741 143 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-212ENST00000557538 VDAC1P21796 283 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 GADD45AP24522 165 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 OPRM1P35372 400 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 P2RX1P51575 399 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 HERVK_113P63121 156 aa1.12□□□□□ -2.23
HIF1A-212ENST00000557538 SP4Q02446 784 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms