RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 EIF3GO75821 320 aaKnown RBP eCLIP4.29□□□□□ -1.72
VPS33B-207ENST00000557470 TMEM50BP56557 158 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 PLP1P60201 277 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 IFITM3Q01628 133 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 RBMS2Q15434 407 aaKnown RBP4.29□□□□□ -1.72
VPS33B-207ENST00000557470 CTF1Q16619 201 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF585BQ52M93 769 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 LINC00336Q6ZUF6 198 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 Q75L30 129 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 HSD17B13Q7Z5P4 300 aaPredicted RBP4.29□□□□□ -1.72
VPS33B-207ENST00000557470 SLC25A42Q86VD7 318 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 VKORC1L1Q8N0U8 176 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 FAM89BQ8N5H3 189 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 DMBX1Q8NFW5 382 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 STXBP6Q8NFX7 210 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 OR4A4PQ8NGN8 299 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 C11orf45Q8TAV5 145 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 OSR1Q8TAX0 266 aaPredicted RBP4.29□□□□□ -1.72
VPS33B-207ENST00000557470 THAP6Q8TBB0 222 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 ARHGAP5-AS1Q96IT6 56 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 CMSS1Q9BQ75 279 aaKnown RBP4.29□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF2Q9BSG1 426 aaPredicted RBP4.29□□□□□ -1.72
VPS33B-207ENST00000557470 CABLES2Q9BTV7 478 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 PECRQ9BY49 303 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF436Q9C0F3 470 aaPredicted RBP4.29□□□□□ -1.72
VPS33B-207ENST00000557470 MAP6D1Q9H9H5 199 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 VPS13DQ5THJ4 4388 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 TRBV6-7A0A0A0MS04 114 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 DNASE2O00115 360 aaPredicted RBP4.28□□□□□ -1.72
VPS33B-207ENST00000557470 DEFB4AO15263 64 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 GABARAPO95166 117 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 RLN2P04090 185 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 CD37P11049 281 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 NQO2P16083 231 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 RAB3BP20337 219 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 PVALBP20472 110 aaPredicted RBP4.28□□□□□ -1.72
VPS33B-207ENST00000557470 DTYMKP23919 212 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 CRHBPP24387 322 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 PSMB6P28072 239 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 RAB5CP51148 216 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 PKIAP61925 76 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 ST3GAL4Q11206 333 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 TPBGQ13641 420 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 ACSM3Q53FZ2 586 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 GVQW1Q8N7I0 195 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 NANOGP1Q8N7R0 232 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 BPIFB6Q8NFQ5 453 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 OR11H4Q8NGC9 324 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 OR5B3Q8NH48 314 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 EEF1AKMT3Q96AZ1 226 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 ADTRPQ96IZ2 230 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 RARRES2Q99969 163 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 URM1Q9BTM9 101 aaKnown RBP4.28□□□□□ -1.72
VPS33B-207ENST00000557470 HINT2Q9BX68 163 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 C11orf68Q9H3H3 251 aaKnown RBP4.28□□□□□ -1.72
VPS33B-207ENST00000557470 DUSP21Q9H596 190 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 AAMDCQ9H7C9 122 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 SLC2A9Q9NRM0 540 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 MRPL27Q9P0M9 148 aaKnown RBP4.28□□□□□ -1.72
VPS33B-207ENST00000557470 APLNQ9ULZ1 77 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 PAM16Q9Y3D7 125 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 HSPB11Q9Y547 144 aa4.28□□□□□ -1.72
VPS33B-207ENST00000557470 RBM7Q9Y580 266 aaKnown RBP4.28□□□□□ -1.72
VPS33B-207ENST00000557470 DNAH6Q9C0G6 4158 aa4.28□□□□□ -1.73
VPS33B-207ENST00000557470 IGLV11-55A0A075B6I3 123 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 TRBV7-1A0A0A6YYK4 115 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 FBLL1A6NHQ2 334 aaKnown RBP4.27□□□□□ -1.73
VPS33B-207ENST00000557470 IGLL5B9A064 214 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 MYL12BO14950 172 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 KBTBD11O94819 623 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 REG1AP05451 166 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 FCGR3AP08637 254 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 METTL15P1P0C7V9 234 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 MYOD1P15172 320 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 GPR183P32249 361 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 RPL27AP46776 148 aaKnown RBP4.27□□□□□ -1.73
VPS33B-207ENST00000557470 MFAP2P55001 183 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
VPS33B-207ENST00000557470 WNT4P56705 351 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 TCTAP57738 103 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 AP3S2P59780 193 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 BLOC1S1P78537 153 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 ICAM4Q14773 271 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 OPCMLQ14982 345 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 KLK9Q2XQG4 91 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 PHLDA2Q53GA4 152 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 Q5BKY6 102 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 COX8CQ7Z4L0 72 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 APRG1Q8IVJ8 170 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 H1FOOQ8IZA3 346 aaPredicted RBP4.27□□□□□ -1.73
VPS33B-207ENST00000557470 SELENOHQ8IZQ5 122 aaKnown RBP4.27□□□□□ -1.73
VPS33B-207ENST00000557470 OR11H2Q8NH07 326 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 MCFD2Q8NI22 146 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 ZNF502Q8TBZ5 544 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 TMEM190Q8WZ59 177 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 GALNT14Q96FL9 552 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 UHRF2Q96PU4 802 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 GINS4Q9BRT9 223 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 NXF2Q9GZY0 626 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms