RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 EWSR1Q01844 656 aaKnown RBP eCLIP11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 OR2F1Q13607 317 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 USF2Q15853 346 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 STX12Q86Y82 276 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 TMEM61Q8N0U2 210 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 OR51G1Q8NGK1 321 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 RHPN1-AS1Q9BWJ2 59 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 MBD2Q9UBB5 411 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 SORL1Q92673 2214 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 K7EIL1 84 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 CHEK1O14757 476 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 FABP1P07148 127 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 GIPP09681 153 aaPredicted RBP11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 LILRB2Q8N423 598 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 ST8SIA2Q92186 375 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 RNF125Q96EQ8 232 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 METTL26Q96S19 204 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 GGACTQ9BVM4 153 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 NPVFQ9HCQ7 196 aa11.19□□□□□ -0.62
VIPAS39-210ENST00000557466 IGHV3-66A0A0C4DH42 116 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 LYL1P12980 280 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 NPPCP23582 126 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 CRYBB3P26998 211 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 LYZP61626 148 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 NHLH2Q02577 135 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 TMEM182Q6ZP80 229 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 RNF2Q99496 336 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 PBDC1Q9BVG4 233 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 TMEM147Q9BVK8 224 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 SLC25A31Q9H0C2 315 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 VSIRQ9H7M9 311 aa11.18□□□□□ -0.62
VIPAS39-210ENST00000557466 UBE2L5PA0A1B0GUS4 154 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 ZNF785A8K8V0 405 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 GATA2P23769 480 aaPredicted RBP11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 S100A11P31949 105 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 HBG1P69891 147 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 HBG2P69892 147 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 GUCA2BQ16661 112 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 VWC2Q2TAL6 325 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 TEPPQ6URK8 271 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 ASB13Q8WXK3 278 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 UQCC1Q9NVA1 299 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 LSM4Q9Y4Z0 139 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 U3KQE9 123 aa11.17□□□□□ -0.62
VIPAS39-210ENST00000557466 DNAH3Q8TD57 4116 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 TRAV25A0A0B4J276 109 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 BMI1P35226 326 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 RAP2BP61225 183 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 Q5BKY6 102 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 BPIFCQ8NFQ6 507 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 OR5C1Q8NGR4 320 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 THAP6Q8TBB0 222 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 MRAPQ8TCY5 172 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 MGST2Q99735 147 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 RABAC1Q9UI14 185 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 WDR83OSQ9Y284 106 aa11.16□□□□□ -0.62
VIPAS39-210ENST00000557466 MEGF8Q7Z7M0 2845 aa11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 EIF2B2P49770 351 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 BAXQ07812 192 aa11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 FAM90A2PQ658T7 463 aa11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 RBPMS2Q6ZRY4 209 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 TCF24Q7RTU0 167 aa11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 CHAC2Q8WUX2 184 aa11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 NARS2Q96I59 477 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 TMEM231Q9H6L2 316 aa11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 HSPB11Q9Y547 144 aa11.15□□□□□ -0.62
VIPAS39-210ENST00000557466 A0A1W2PS18 150 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 TSPAN4O14817 238 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 AGPAT2O15120 278 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 CFDP00746 253 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 LINC00869P0C866 280 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 RPL12P30050 165 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 SELENOTP62341 195 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 CLINT1Q14677 625 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 ATP6V1FQ16864 119 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 LAMTOR1Q6IAA8 161 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 ZNF546Q86UE3 836 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 STPG3Q8N7X2 389 aa11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-210ENST00000557466 IGKV3-7A0A075B6H7 116 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 G3V3Q6 166 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 DFFBO76075 338 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 CD7P09564 240 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 FGF7P21781 194 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 CD81P60033 236 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 FGL1Q08830 312 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 C16orf54Q6UWD8 224 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 Q6ZNX1 250 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 Q8N1Y9 231 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 OR2T35Q8NGX2 323 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 GRAMD2BQ96HH9 432 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 GGTLC1Q9BX51 225 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 DOK5Q9P104 306 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 SLC45A2Q9UMX9 530 aa11.13□□□□□ -0.63
VIPAS39-210ENST00000557466 BUB3O43684 328 aa11.12□□□□□ -0.63
VIPAS39-210ENST00000557466 ORM2P19652 201 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms