RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TBCEQ15813 527 aaPredicted RBP6.15□□□□□ -1.42
NEDD1-211ENST00000557454 RAB11BQ15907 218 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 SMN1Q16637 294 aaKnown RBP6.15□□□□□ -1.42
NEDD1-211ENST00000557454 SPINK9Q5DT21 86 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 ZNF493Q6ZR52 646 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 OR4X1Q8NH49 305 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 RHOXF1Q8NHV9 184 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 GFI1Q99684 422 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 FKBP11Q9NYL4 201 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 CACNG5Q9UF02 275 aa6.15□□□□□ -1.42
NEDD1-211ENST00000557454 RCL1Q9Y2P8 373 aaKnown RBP6.15□□□□□ -1.42
NEDD1-211ENST00000557454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.15□□□□□ -1.42
NEDD1-211ENST00000557454 TMEM272A0A1B0GTI8 110 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 CCNKO75909 580 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 ALPLP05186 524 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 DTYMKP23919 212 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 DHODHQ02127 395 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 MSMO1Q15800 293 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 SFXN4Q6P4A7 337 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 GPR141Q7Z602 305 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 TMEM256Q8N2U0 113 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 CLRN3Q8NCR9 226 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 OR10R2Q8NGX6 335 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 APH1BQ8WW43 257 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 RPRMQ9NS64 109 aa6.14□□□□□ -1.43
NEDD1-211ENST00000557454 ISLRO14498 428 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 IGLC1P0CG04 106 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 GADD45AP24522 165 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 OPRK1P41145 380 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 ETV6P41212 452 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 SCAND1P57086 179 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 ERHP84090 104 aaKnown RBP6.13□□□□□ -1.43
NEDD1-211ENST00000557454 C2orf76Q3KRA6 126 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 CNIH2Q6PI25 160 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 TEPPQ6URK8 271 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 ZNF818PQ6ZRF7 136 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 ZBTB34Q8NCN2 500 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 Q8WTZ3 238 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 FCAMRQ8WWV6 532 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 FAM3DQ96BQ1 224 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 SLC25A39Q9BZJ4 359 aaPredicted RBP6.13□□□□□ -1.43
NEDD1-211ENST00000557454 DPH3P1Q9H4G8 78 aa6.13□□□□□ -1.43
NEDD1-211ENST00000557454 DIMT1Q9UNQ2 313 aaKnown RBP6.13□□□□□ -1.43
NEDD1-211ENST00000557454 BOLA2-SMG1P6H3BVE0 249 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 PAX4O43316 350 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 CALRP27797 417 aaKnown RBP6.12□□□□□ -1.43
NEDD1-211ENST00000557454 LPAR6P43657 344 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 HSD17B12Q53GQ0 312 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 Q6ZTI0 123 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 TMEM37Q8WXS4 190 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 PAXXQ9BUH6 204 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 SLC5A7Q9GZV3 580 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 ORC6Q9Y5N6 252 aa6.12□□□□□ -1.43
NEDD1-211ENST00000557454 A0A0B4J293 547 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 RLN1P04808 185 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 CD1AP06126 327 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 CLEC2LP0C7M8 214 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 PTHLHP12272 177 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 FCGR2CP31995 323 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 SNCAP37840 140 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 CDKN1BP46527 198 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 FXYD4P59646 89 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 HES5Q5TA89 166 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 HACD4Q5VWC8 232 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 OR1S2Q8NGQ3 325 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 OR6F1Q8NGZ6 308 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 LINC01600Q96MT4 127 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 TSC22D3Q99576 134 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 RAB22AQ9UL26 194 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 POMPQ9Y244 141 aa6.11□□□□□ -1.43
NEDD1-211ENST00000557454 AK6Q9Y3D8 172 aaKnown RBP6.11□□□□□ -1.43
NEDD1-211ENST00000557454 TRGV2A0A075B6R0 118 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 TRAV30A0A087WSZ9 112 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 TMEM235A6NFC5 223 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 RBFOX3A6NFN3 312 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 SNURFLB1AK76 121 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 CORTO00230 105 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 EI24O14681 340 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 ZNF324O75467 553 aaPredicted RBP6.1□□□□□ -1.43
NEDD1-211ENST00000557454 DUSP14O95147 198 aaKnown RBP6.1□□□□□ -1.43
NEDD1-211ENST00000557454 PPYP01298 95 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 RNASE2P10153 161 aaKnown RBP6.1□□□□□ -1.43
NEDD1-211ENST00000557454 F2RP25116 425 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 OR10J1P30954 320 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 YPEL3P61236 119 aaPredicted RBP6.1□□□□□ -1.43
NEDD1-211ENST00000557454 HSPE1P61604 102 aaKnown RBP6.1□□□□□ -1.43
NEDD1-211ENST00000557454 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 TMEM17Q86X19 198 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 TSPAN14Q8NG11 270 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 OR4A16Q8NH70 328 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 NUDCD2Q8WVJ2 157 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 SLC7A6OSQ96CW6 309 aaPredicted RBP6.1□□□□□ -1.43
NEDD1-211ENST00000557454 C16orf92Q96LL3 132 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 ANXA10Q9UJ72 324 aa6.1□□□□□ -1.43
NEDD1-211ENST00000557454 IBA57-AS1B1ANH7 110 aa6.09□□□□□ -1.43
NEDD1-211ENST00000557454 WBP4O75554 376 aaKnown RBP6.09□□□□□ -1.43
NEDD1-211ENST00000557454 ZNF182P17025 639 aaPredicted RBP6.09□□□□□ -1.43
NEDD1-211ENST00000557454 CALB2P22676 271 aa6.09□□□□□ -1.43
NEDD1-211ENST00000557454 NUP62P37198 522 aaPredicted RBP6.09□□□□□ -1.43
NEDD1-211ENST00000557454 RND2P52198 227 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms