RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 GALR1P47211 349 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 TAS2R45P59539 299 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 FABP9Q0Z7S8 132 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 MRPL41Q8IXM3 137 aaKnown RBP4.7□□□□□ -1.66
SYNE2-225ENST00000557060 ZNF843Q8N446 348 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 OR1P1Q8NH06 330 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 OCC1Q8TAD7 63 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 RNASEH2CQ8TDP1 164 aaKnown RBP4.7□□□□□ -1.66
SYNE2-225ENST00000557060 ARPC1AQ92747 370 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 FRZBQ92765 325 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 OR5B12Q96R08 314 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 HSPB9Q9BQS6 159 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 PIMREGQ9BSJ6 248 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 PAXXQ9BUH6 204 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 GNB4Q9HAV0 340 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 GCN1Q92616 2671 aaKnown RBP4.7□□□□□ -1.66
SYNE2-225ENST00000557060 PDE6DO43924 150 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 GNG7O60262 68 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 CA1P00915 261 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-225ENST00000557060 IL4P05112 153 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 FAM106CPP0CH98 169 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 IGHV4-38-2P0DP08 117 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 KRTAP10-9P60411 292 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 CCDC144NLQ6NUI1 221 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 LINC01551Q86U37 167 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 C1QL4Q86Z23 238 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 SIRPDQ9H106 197 aa4.7□□□□□ -1.66
SYNE2-225ENST00000557060 RNASE7Q9H1E1 156 aaKnown RBP4.7□□□□□ -1.66
SYNE2-225ENST00000557060 IGHV3-66A0A0C4DH42 116 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 CLN5O75503 358 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 CRYGBP07316 175 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 RD3LP0DJH9 198 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 GPX4P36969 197 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-225ENST00000557060 BPIFB3P59826 476 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 ERVFC1-1P60608 527 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 FLI1Q01543 452 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-225ENST00000557060 PNRC1Q12796 327 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-225ENST00000557060 CENPWQ5EE01 88 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 SLC25A2Q9BXI2 301 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 PGPEP1Q9NXJ5 209 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 CENPVL3A0A0U1RRI6 287 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 MDFIC2A0A1B0GVS7 189 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 HELTA6NFD8 242 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 ODF3BA8MYP8 253 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 NPFFO15130 113 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 HYPMO75409 117 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 GNG4P50150 75 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 UNQ5815/PRO19632Q6UWF5 114 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 SGMS2Q8NHU3 365 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 OR51M1Q9H341 326 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 BIN3Q9NQY0 253 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 HIF1ANQ9NWT6 349 aa4.69□□□□□ -1.66
SYNE2-225ENST00000557060 OVOL3O00110 214 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 ZNF207O43670 478 aaKnown RBP4.68□□□□□ -1.66
SYNE2-225ENST00000557060 COX6B1P14854 86 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 S100PP25815 95 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 FCGR2BP31994 310 aaPredicted RBP4.68□□□□□ -1.66
SYNE2-225ENST00000557060 GFI1BQ5VTD9 330 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 ETFRF1Q6IPR1 90 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 LCNL1Q6ZST4 164 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 EXOC3-AS1Q8N2X6 119 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 DUX5Q96PT3 197 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 FLNBO75369 2602 aaKnown RBP4.68□□□□□ -1.66
SYNE2-225ENST00000557060 TRAV8-1A0A0A6YYK1 113 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 ZNF320A2RRD8 509 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 PGPA6NDG6 321 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 PPP5D1E7EU14 171 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 ATP6V0E1O15342 81 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 CTRB1P17538 263 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 BRS3P32247 399 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 IGFL4Q6B9Z1 124 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 CTRB2Q6GPI1 263 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 SFRP2Q96HF1 295 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 FAM167A-AS1Q96KT0 104 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 C17orf77Q96MU5 243 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 PRELID1Q9Y255 219 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 IGHV7-81A0A0B4J1V7 117 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 K7EIM0 57 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 K7EN84 100 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 NDUFB8O95169 186 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 IGKV1-17P01599 117 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 SLC25A5P05141 298 aaKnown RBP4.68□□□□□ -1.66
SYNE2-225ENST00000557060 FRMD6-AS1P0C7T7 363 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 IGLC1P0CG04 106 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 GPR183P32249 361 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 UBE2E1P51965 193 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 RAB4BP61018 213 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 PAX2Q02962 417 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 SRSF1Q07955 248 aaKnown RBP eCLIP4.68□□□□□ -1.66
SYNE2-225ENST00000557060 OR1L4Q8NGR5 311 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 PFDN5Q99471 154 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 TMEM167BQ9NRX6 74 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 FBXL7Q9UJT9 491 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 SORL1Q92673 2214 aa4.68□□□□□ -1.66
SYNE2-225ENST00000557060 A0A087WWC5 75 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 B4DEV8 164 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 I3L2K1 104 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 TGFAP01135 160 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 C15orf32Q32M92 178 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 ZNF562Q6V9R5 426 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms