RNA–Protein interactions for RNA: ENST00000556787.5

PAPOLA-222, Transcript of poly(A) polymerase alpha, human

TSL 2

Gene PAPOLA, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-222	ENST00000556787	HIST1H2BL	Q99880	126 aa		0.69	□□□□□ -2.3
PAPOLA-222	ENST00000556787	NHP2	Q9NX24	153 aa	Known RBP	0.69	□□□□□ -2.3
PAPOLA-222	ENST00000556787	TVP23B	Q9NYZ1	205 aa		0.69	□□□□□ -2.3
PAPOLA-222	ENST00000556787	MYH7B	A7E2Y1	1941 aa		0.69	□□□□□ -2.3
PAPOLA-222	ENST00000556787	ARHGEF28	Q8N1W1	1705 aa	Known RBP	0.69	□□□□□ -2.3
PAPOLA-222	ENST00000556787	TAF1L	Q8IZX4	1826 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	EML5	Q05BV3	1969 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	C1orf196	B1AJZ1	125 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	E2F6	O75461	281 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	OR7C1	O76099	320 aa	Predicted RBP	0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	CYBA	P13498	195 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	RNASE4	P34096	147 aa	Known RBP	0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	DEFA3	P59666	94 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	ESRG	Q1W209	222 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	BORCS5	Q969J3	196 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	SIGMAR1	Q99720	223 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	PARVB	Q9HBI1	364 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	SLC35A3	Q9Y2D2	325 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	KIF1B	O60333	1816 aa		0.68	□□□□□ -2.3
PAPOLA-222	ENST00000556787	SCN3A	Q9NY46	2000 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	PCF11	O94913	1555 aa	Known RBP	0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	TRAV4	A0A0B4J268	109 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787		A0A1W2PPM0	123 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	INE1	O15225	51 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	S100A6	P06703	90 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	FADD	Q13158	208 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	SPATA8	Q6RVD6	105 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	PATE1	Q8WXA2	126 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	UTP11	Q9Y3A2	253 aa	Known RBP	0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	RIMBP3C	A6NJZ7	1639 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	RIMBP3B	A6NNM3	1639 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	RIMBP3	Q9UFD9	1639 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	OBSL1	O75147	1896 aa		0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	AHNAK	Q09666	5890 aa	Known RBP	0.67	□□□□□ -2.3
PAPOLA-222	ENST00000556787	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787	FAM159B	A6NKW6	160 aa		0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787		J3QRK9	145 aa		0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787	CYB5B	O43169	146 aa		0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787		Q8IYB0	196 aa		0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787	OR11H6	Q8NGC7	330 aa		0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787	STAG3L4	Q8TBR4	150 aa		0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787	FAM172A	Q8WUF8	416 aa		0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787	BCL2L10	Q9HD36	194 aa		0.66	□□□□□ -2.3
PAPOLA-222	ENST00000556787	ZNF736	B4DX44	427 aa	Predicted RBP	0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	CST2	P09228	141 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	SERPINB9	P50453	376 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	PIGP	P57054	158 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	DYNLT1	P63172	113 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	SBSPON	Q8IVN8	264 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	LINC00301	Q8NCQ3	95 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	SLAMF6	Q96DU3	332 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	PRADC1	Q9BSG0	188 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	TMEM126A	Q9H061	195 aa		0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	NMNAT1	Q9HAN9	279 aa	Predicted RBP	0.65	□□□□□ -2.31
PAPOLA-222	ENST00000556787	FMN1	Q68DA7	1419 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	TRBV19	A0A075B6N1	114 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	NCR3	O14931	201 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	IFNA6	P05013	189 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	ERP29	P30040	261 aa	Known RBP	0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	ANP32A	P39687	249 aa	Known RBP	0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	ATP5G3	P48201	142 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	RHOB	P62745	196 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	RRN3P1	Q2M238	152 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	MPV17L	Q2QL34	196 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	LIN52	Q52LA3	116 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	AKIRIN2	Q53H80	203 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	SOSTDC1	Q6X4U4	206 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	KRTAP19-3	Q7Z4W3	81 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	OR2T10	Q8NGZ9	312 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	TEX47	Q8TBZ9	253 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	GNPDA2	Q8TDQ7	276 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	ITFG2	Q969R8	447 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	KIFC1	Q9BW19	673 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	C14orf132	Q9NPU4	83 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	CDC42SE1	Q9NRR8	79 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	PEAK1	Q9H792	1746 aa		0.64	□□□□□ -2.31
PAPOLA-222	ENST00000556787	SCN8A	Q9UQD0	1980 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	CCDC160	A6NGH7	325 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	TMEM210	A6NLX4	147 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	GADD45G	O95257	159 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	EIF5A	P63241	154 aa	Known RBP	0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	REEP5	Q00765	189 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	SPA17	Q15506	151 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	LYRM7	Q5U5X0	104 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	TEX261	Q6UWH6	196 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	CLECL1	Q8IZS7	167 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	SLC30A7	Q8NEW0	376 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	BTF3L4	Q96K17	158 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787		U3KQ87	197 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	ADGRL3	Q9HAR2	1447 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	MYH10	P35580	1976 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	KIAA1549	Q9HCM3	1950 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	PLXNA4	Q9HCM2	1894 aa		0.63	□□□□□ -2.31
PAPOLA-222	ENST00000556787	DHFR	P00374	187 aa		0.62	□□□□□ -2.31
PAPOLA-222	ENST00000556787	ZNF25	P17030	456 aa	Predicted RBP	0.62	□□□□□ -2.31
PAPOLA-222	ENST00000556787	SRP14	P37108	136 aa	Known RBP	0.62	□□□□□ -2.31
PAPOLA-222	ENST00000556787	KRR1	Q13601	381 aa	Known RBP	0.62	□□□□□ -2.31
PAPOLA-222	ENST00000556787	C22orf39	Q6P5X5	142 aa		0.62	□□□□□ -2.31
PAPOLA-222	ENST00000556787	GOLT1A	Q6ZVE7	132 aa		0.62	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms