RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 IGKV1D-37A0A075B6S9 117 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 A0A1W2PS18 150 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 PRSS46E5RG02 174 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 SSNA1O43805 119 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 FABP1P07148 127 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 CRYBB3P26998 211 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 TAS2R30P59541 319 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 RRAS2P62070 204 aaPredicted RBP12.79□□□□□ -0.36
PSEN1-217ENST00000556533 ACOT7LQ6ZUV0 252 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 VSIRQ9H7M9 311 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 SRD5A3Q9H8P0 318 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 C19orf73Q9NVV2 129 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 UBQLN2Q9UHD9 624 aa12.79□□□□□ -0.36
PSEN1-217ENST00000556533 OR4C46A6NHA9 309 aa12.78□□□□□ -0.36
PSEN1-217ENST00000556533 TSC22D2O75157 780 aa12.78□□□□□ -0.36
PSEN1-217ENST00000556533 HNRNPCP07910 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
PSEN1-217ENST00000556533 NHLRC4P0CG21 123 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-217ENST00000556533 PAFAH1B2P68402 229 aa12.78□□□□□ -0.36
PSEN1-217ENST00000556533 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-217ENST00000556533 TMEM14EPQ6UXP3 125 aa12.78□□□□□ -0.36
PSEN1-217ENST00000556533 OR10P1Q8NGE3 313 aa12.78□□□□□ -0.36
PSEN1-217ENST00000556533 GRAMD2BQ96HH9 432 aa12.78□□□□□ -0.36
PSEN1-217ENST00000556533 RABAC1Q9UI14 185 aa12.78□□□□□ -0.36
PSEN1-217ENST00000556533 A8MZ25 164 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 DNASE2O00115 360 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-217ENST00000556533 PVALBP20472 110 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-217ENST00000556533 P2RY1P47900 373 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 CAV2P51636 162 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 LYZP61626 148 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 RAB32Q13637 225 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 FAM90A2PQ658T7 463 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 THAP8Q8NA92 274 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 RNF125Q96EQ8 232 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 TRGV9Q99603 122 aa12.77□□□□□ -0.37
PSEN1-217ENST00000556533 IGKV1OR2-108A0A075B7D4 117 aa12.76□□□□□ -0.37
PSEN1-217ENST00000556533 PMS2P5A8MQ11 134 aa12.76□□□□□ -0.37
PSEN1-217ENST00000556533 CD5P06127 495 aa12.76□□□□□ -0.37
PSEN1-217ENST00000556533 MS4A6AQ9H2W1 248 aa12.76□□□□□ -0.37
PSEN1-217ENST00000556533 MGAT4CQ9UBM8 478 aa12.76□□□□□ -0.37
PSEN1-217ENST00000556533 RBMY1BA6NDE4 496 aaKnown RBP12.75□□□□□ -0.37
PSEN1-217ENST00000556533 RBMY1EA6NEQ0 496 aaKnown RBP12.75□□□□□ -0.37
PSEN1-217ENST00000556533 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
PSEN1-217ENST00000556533 RBMY1DP0C7P1 496 aaKnown RBP12.75□□□□□ -0.37
PSEN1-217ENST00000556533 IL15RAQ13261 267 aa12.75□□□□□ -0.37
PSEN1-217ENST00000556533 STXBP6Q8NFX7 210 aa12.75□□□□□ -0.37
PSEN1-217ENST00000556533 PPP1R14BQ96C90 147 aa12.75□□□□□ -0.37
PSEN1-217ENST00000556533 U3KQE9 123 aa12.75□□□□□ -0.37
PSEN1-217ENST00000556533 CST7O76096 145 aa12.74□□□□□ -0.37
PSEN1-217ENST00000556533 PTTG1O95997 202 aa12.74□□□□□ -0.37
PSEN1-217ENST00000556533 GATA2P23769 480 aaPredicted RBP12.74□□□□□ -0.37
PSEN1-217ENST00000556533 EIF2B2P49770 351 aaKnown RBP12.74□□□□□ -0.37
PSEN1-217ENST00000556533 DLK1P80370 383 aa12.74□□□□□ -0.37
PSEN1-217ENST00000556533 ARL16Q0P5N6 197 aa12.74□□□□□ -0.37
PSEN1-217ENST00000556533 HAGHQ16775 308 aa12.74□□□□□ -0.37
PSEN1-217ENST00000556533 LRRC37A5PQ49AS3 106 aa12.74□□□□□ -0.37
PSEN1-217ENST00000556533 C16orf54Q6UWD8 224 aa12.74□□□□□ -0.37
PSEN1-217ENST00000556533 TMEM144Q7Z5S9 345 aa12.74□□□□□ -0.37
PSEN1-217ENST00000556533 RLN2P04090 185 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 ODF3L2Q3SX64 289 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 TMEM182Q6ZP80 229 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-217ENST00000556533 APRG1Q8IVJ8 170 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 TMEM217Q8N7C4 229 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 BPIFCQ8NFQ6 507 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 ZMAT4Q9H898 229 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 PFDN2Q9UHV9 154 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 ALG5Q9Y673 324 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 U3KQK5 164 aa12.73□□□□□ -0.37
PSEN1-217ENST00000556533 DNAH9Q9NYC9 4486 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 HELTA6NFD8 242 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 DEDDO75618 318 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 ORM2P19652 201 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 CMC4P56277 68 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-217ENST00000556533 CYCSP99999 105 aaKnown RBP12.72□□□□□ -0.37
PSEN1-217ENST00000556533 SLC38A11Q08AI6 406 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 CYP2G1PQ6ZSU1 146 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 CITED4Q96RK1 184 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 NMES1Q9C002 83 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 C11orf1Q9H5F2 150 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 NPVFQ9HCQ7 196 aa12.72□□□□□ -0.37
PSEN1-217ENST00000556533 COL7A1Q02388 2944 aa12.71□□□□□ -0.37
PSEN1-217ENST00000556533 IGSF23A1L1A6 192 aa12.71□□□□□ -0.37
PSEN1-217ENST00000556533 BUB3O43684 328 aa12.71□□□□□ -0.37
PSEN1-217ENST00000556533 CFDP00746 253 aaPredicted RBP12.71□□□□□ -0.37
PSEN1-217ENST00000556533 H2BFSP57053 126 aa12.71□□□□□ -0.37
PSEN1-217ENST00000556533 ZNF124Q15973 351 aa12.71□□□□□ -0.37
PSEN1-217ENST00000556533 OR1B1Q8NGR6 318 aa12.71□□□□□ -0.37
PSEN1-217ENST00000556533 GLMPQ8WWB7 406 aa12.71□□□□□ -0.37
PSEN1-217ENST00000556533 LYRM2Q9NU23 88 aaPredicted RBP12.71□□□□□ -0.37
PSEN1-217ENST00000556533 LOC102724200A0A096LPH7 203 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-217ENST00000556533 NUP62P37198 522 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-217ENST00000556533 SULT1A1P50225 295 aa12.7□□□□□ -0.38
PSEN1-217ENST00000556533 AP2S1P53680 142 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-217ENST00000556533 TEPPQ6URK8 271 aa12.7□□□□□ -0.38
PSEN1-217ENST00000556533 LINC00322Q6ZN03 302 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-217ENST00000556533 STX12Q86Y82 276 aa12.7□□□□□ -0.38
PSEN1-217ENST00000556533 FAM24BQ8N5W8 94 aa12.7□□□□□ -0.38
PSEN1-217ENST00000556533 TMEM252Q8N6L7 170 aa12.7□□□□□ -0.38
PSEN1-217ENST00000556533 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
PSEN1-217ENST00000556533 GGACTQ9BVM4 153 aa12.7□□□□□ -0.38
PSEN1-217ENST00000556533 DOK5Q9P104 306 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms