RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PSG8Q9UQ74 426 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 IGKV3-15P01624 115 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 KRTAP27-1Q3LI81 207 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 RNFT1Q5M7Z0 435 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 C16orf92Q96LL3 132 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 KLK15Q9H2R5 256 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 TRAV8-6A0A0B4J262 113 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 H3BVH4 76 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 PPP1R27Q86WC6 154 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 C11orf1Q9H5F2 150 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 METTL26Q96S19 204 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 TMEM14BQ9NUH8 114 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 TCRAP04437 139 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 FER1L6-AS1Q8NA97 138 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 SLC25A15Q9Y619 301 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 LOC107984156A0A0G2JMH3 177 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 ZNF329Q86UD4 541 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 ARL17AQ8IVW1 177 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 MS4A6AQ9H2W1 248 aa12.28□□□□□ -0.44
ARHGEF40-207ENST00000556399 DOCK10Q96BY6 2186 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 PCNX3Q9H6A9 2034 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 TMEM238LA0A1B0GVL6 79 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 A6NJY4 79 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 SYS1-DBNDD2H3BUS1 97 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 IGLC2P0DOY2 106 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 IGLC3P0DOY3 106 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 TEX43Q6ZNM6 134 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 C2orf16Q68DN1 1984 aa12.27□□□□□ -0.44
ARHGEF40-207ENST00000556399 CACNG7P62955 275 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 TMEM167AQ8TBQ9 72 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 TMEM133Q9H2Q1 129 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 MRPS16Q9Y3D3 137 aaKnown RBP12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 FAM106CPP0CH98 169 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 PRSS8Q16651 343 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 DMRTC2Q8IXT2 367 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 EXOC3-AS1Q8N2X6 119 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 LTBP2Q14767 1821 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 GGTLC3B5MD39 225 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 H0YJW9 148 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 FOXC2Q99958 501 aa12.27□□□□□ -0.45
ARHGEF40-207ENST00000556399 PDLIM4P50479 330 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 Q6ZR03 302 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 RNF125Q96EQ8 232 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 IGHV3OR16-13A0A075B7E8 117 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 IGHV3-74A0A0B4J1X5 117 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 F2Z2F3 143 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 HBDP02042 147 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 NEUROG1Q92886 237 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 GAFA1Q96PS6 74 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 COX11Q9Y6N1 276 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 IGHV3OR16-8A0A075B7F1 116 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 B9A039 149 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 ZNF138P52744 262 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 SLC25A48Q6ZT89 311 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 CRIP3Q6Q6R5 217 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 C21orf62Q9NYP8 219 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 DPM3Q9P2X0 92 aa12.26□□□□□ -0.45
ARHGEF40-207ENST00000556399 KIR2DL5BA0A0G2JN68 375 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 KIR2DL5BA0A0G2JPC4 375 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 K7EN84 100 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 KIR2DL5AQ8N109 375 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 C11orf52Q96A22 123 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 A0A087X0K7 114 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 VWC2Q2TAL6 325 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 TMEM200BQ69YZ2 307 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 MCRIP2Q9BUT9 160 aaKnown RBP12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 JKAMPQ9P055 326 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 ZNRD1Q9P1U0 126 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 NPPCP23582 126 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 APOBEC3AP31941 199 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 SLAQ13239 276 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 C5orf30Q96GV9 206 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 TRAV8-1A0A0A6YYK1 113 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 C15orf65H3BRN8 121 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 CCL21O00585 134 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 PSG1P11464 419 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 CD59P13987 128 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 DLX1P56177 255 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 SEC11AP67812 179 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 OR10J6PQ8NGY7 276 aa12.25□□□□□ -0.45
ARHGEF40-207ENST00000556399 NUPR1O60356 82 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 PVRIGQ6DKI7 326 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 TRGV9Q99603 122 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 ITGB1BP1O14713 200 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 TMEM249Q2WGJ8 235 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 FAM57AQ8TBR7 257 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 LOC105371242A0A075B767 164 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 WNT2P09544 360 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 RAB9AP51151 201 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 TPTE2P1Q5T6R2 138 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 OR4X2Q8NGF9 303 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 PHLDA3Q9Y5J5 127 aa12.24□□□□□ -0.45
ARHGEF40-207ENST00000556399 PMS2P5A8MQ11 134 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 OR11H12B2RN74 326 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 LEPP41159 167 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 GAGE1Q13065 139 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 OR11H1Q8NG94 326 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 OR11H2Q8NH07 326 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 RCHY1Q96PM5 261 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms