RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 USF2Q15853 346 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-221ENST00000556342 FAM222AQ5U5X8 452 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 PRSS54Q6PEW0 395 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 SIGLEC15Q6ZMC9 328 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 ZNF486Q96H40 463 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-221ENST00000556342 NIPSNAP3BQ9BS92 247 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 SCPEP1Q9HB40 452 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 RFNGQ9Y644 331 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 C3orf85A0A1B0GTC6 90 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 C16orf90A8MZG2 172 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 M0QYG6 137 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 BUB3O43684 328 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 GSTZ1O43708 216 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-221ENST00000556342 SLC25A4P12235 298 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 HTN3P15516 51 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 RPS19P39019 145 aaKnown RBP7.59□□□□□ -1.19
SYNE2-221ENST00000556342 HTR2BP41595 481 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 FXYD7P58549 80 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 TRIM16LQ309B1 348 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 GDF5OSQ5U4N7 250 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 SNX29P2Q8IUI4 249 aa7.59□□□□□ -1.19
SYNE2-221ENST00000556342 RRNAD1Q96FB5 475 aaKnown RBP7.59□□□□□ -1.19
SYNE2-221ENST00000556342 IGKV3-20P01619 116 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 DEFB1P60022 68 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 SPCS3P61009 180 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 OXA1LQ15070 435 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 SP6Q3SY56 376 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 AARDQ4LEZ3 155 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 TMEM88Q6PEY1 159 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 LHFPL1Q86WI0 220 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 MAPKAPK5-AS1Q8N8E1 139 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 ZNF709Q8N972 641 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 RNASE11Q8TAA1 199 aaKnown RBP7.58□□□□□ -1.2
SYNE2-221ENST00000556342 RNASEH2CQ8TDP1 164 aaKnown RBP7.58□□□□□ -1.2
SYNE2-221ENST00000556342 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 Q9H521 79 aa7.58□□□□□ -1.2
SYNE2-221ENST00000556342 SMIM31A0A1B0GVY4 71 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 NXPH3O95157 252 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 TOMM40O96008 361 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 HBE1P02100 147 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 APOA1P02647 267 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 RD3LP0DJH9 198 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 UCP1P25874 307 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 FAM3BP58499 235 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-221ENST00000556342 C2orf83Q53S99 150 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 FOXI2Q6ZQN5 318 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 ARRDC1Q8N5I2 433 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 SLC24A4Q8NFF2 622 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 OR52E5Q8NH55 327 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 NPIPB3Q92617 1050 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 LINC00052Q96N35 136 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 CLUHP3Q96NS8 147 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 SAV1Q9H4B6 383 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-221ENST00000556342 HEYLQ9NQ87 328 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-221ENST00000556342 COPZ2Q9P299 210 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 COMMD3Q9UBI1 195 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 TMED3Q9Y3Q3 217 aa7.57□□□□□ -1.2
SYNE2-221ENST00000556342 YTHDF2Q9Y5A9 579 aaKnown RBP7.57□□□□□ -1.2
SYNE2-221ENST00000556342 NACAE9PAV3 2078 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 HERC1Q15751 4861 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
SYNE2-221ENST00000556342 LOC102723971A0A1B0GUV8 181 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 C9orf118A6NHY6 69 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 LSM3P62310 102 aaKnown RBP7.56□□□□□ -1.2
SYNE2-221ENST00000556342 RNASE10Q5GAN6 216 aaKnown RBP7.56□□□□□ -1.2
SYNE2-221ENST00000556342 LCE5AQ5TCM9 118 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 ETFRF1Q6IPR1 90 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 FAM219AQ8IW50 185 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 CCDC71LQ8N9Z2 235 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 WDR12Q9GZL7 423 aaKnown RBP7.56□□□□□ -1.2
SYNE2-221ENST00000556342 SLC35B3Q9H1N7 401 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-221ENST00000556342 GOLT1BQ9Y3E0 138 aa7.56□□□□□ -1.2
SYNE2-221ENST00000556342 B3GALNT1O75752 331 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 PSG1P11464 419 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 NUP62P37198 522 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-221ENST00000556342 ID1P41134 155 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 PSMB3P49720 205 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 DAD1P61803 113 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 PSG9Q00887 426 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 ZNF79Q15937 498 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 RNASE12Q5GAN4 147 aaKnown RBP7.55□□□□□ -1.2
SYNE2-221ENST00000556342 C1orf158Q8N1D5 194 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 C15orf53Q8NAA6 179 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 OR4B1Q8NGF8 309 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 OR51G1Q8NGK1 321 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 ACY3Q96HD9 319 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 ATG101Q9BSB4 218 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 KLK11Q9UBX7 282 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 CACNG5Q9UF02 275 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
SYNE2-221ENST00000556342 NBDYA0A0U1RRE5 68 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 CEBPZOSA8MTT3 80 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 SOCS3O14543 225 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 CDS2O95674 445 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 CD3DP04234 171 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 ELK1P19419 428 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 TBPP20226 339 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 RORCP51449 518 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms