RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 NPBQ8NG41 125 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 TBX15Q96SF7 602 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 MAP1LC3BQ9GZQ8 125 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 SLC35B3Q9H1N7 401 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 VSIRQ9H7M9 311 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 C1RLQ9NZP8 487 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 HECTD4Q9Y4D8 3996 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 CGB1A6NKQ9 187 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 IGKV1D-33P01593 117 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 IGKV1-33P01594 117 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 SLC25A16P16260 332 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 CNTFRP26992 372 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 RPL29P47914 159 aaKnown RBP5.4□□□□□ -1.54
SLIRP-204ENST00000555890 CDC34P49427 236 aaPredicted RBP5.4□□□□□ -1.54
SLIRP-204ENST00000555890 CCL20P78556 96 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 WT1-ASQ06250 92 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 MMDQ15546 238 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 HAGHQ16775 308 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 KHDC3LQ587J8 217 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 AWAT1Q58HT5 328 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 ZNF506Q5JVG8 444 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 SLC16A13Q7RTY0 426 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 RPP25LQ8N5L8 163 aaKnown RBP5.4□□□□□ -1.54
SLIRP-204ENST00000555890 ZNF114Q8NC26 417 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 OR1L6Q8NGR2 347 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 GLMPQ8WWB7 406 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 C22orf15Q8WYQ4 148 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 MGST2Q99735 147 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 SCRT1Q9BWW7 348 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 CTDSP1Q9GZU7 261 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 FBXL15Q9H469 300 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 GNG13Q9P2W3 67 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 LSM4Q9Y4Z0 139 aaKnown RBP5.4□□□□□ -1.54
SLIRP-204ENST00000555890 PXMP4Q9Y6I8 212 aa5.4□□□□□ -1.54
SLIRP-204ENST00000555890 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.4□□□□□ -1.54
SLIRP-204ENST00000555890 DNAH3Q8TD57 4116 aa5.4□□□□□ -1.55
SLIRP-204ENST00000555890 WNK2Q9Y3S1 2297 aa5.4□□□□□ -1.55
SLIRP-204ENST00000555890 IGHV4-61A0A0C4DH41 118 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 IGLC7A0M8Q6 106 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 ZFP92A6NM28 416 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 SEC14L6B5MCN3 397 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 E7EUB6 86 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 NPFFO15130 113 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 NDUFA3O95167 84 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 MT-CO2P00403 227 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 HSPB1P04792 205 aaKnown RBP5.39□□□□□ -1.55
SLIRP-204ENST00000555890 ELANEP08246 267 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 SRP19P09132 144 aaKnown RBP5.39□□□□□ -1.55
SLIRP-204ENST00000555890 BCL2P10415 239 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 TMEM11P17152 192 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 GATA3P23771 443 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 PSMB3P49720 205 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 FGF8P55075 233 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-204ENST00000555890 B2MP61769 119 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 RHOBP62745 196 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 PAX8Q06710 450 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 EBI3Q14213 229 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 GAMTQ14353 236 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 ZNF726P1Q15940 193 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 MRGPRG-AS1Q2M3A8 158 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 TMEM249Q2WGJ8 235 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 SOHLH1Q5JUK2 328 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 C10orf55Q5SWW7 151 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 LDLRAD2Q5SZI1 272 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 MIC13Q5XKP0 118 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 TMEM88Q6PEY1 159 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 IL17RELQ6ZVW7 336 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 SLC35E3Q7Z769 313 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 OR1P1Q8NH06 330 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 NANPQ8TBE9 248 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 MRAPQ8TCY5 172 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 RXFP4Q8TDU9 374 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 SSMEM1Q8WWF3 244 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 SRSF12Q8WXF0 261 aaKnown RBP5.39□□□□□ -1.55
SLIRP-204ENST00000555890 ACY3Q96HD9 319 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 P2RX4Q99571 388 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 GGTLC1Q9BX51 225 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 NKX6-2Q9C056 277 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-204ENST00000555890 MEGF9Q9H1U4 602 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 SLC25A22Q9H936 323 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 MANBALQ9NQG1 85 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 VAX2Q9UIW0 290 aa5.39□□□□□ -1.55
SLIRP-204ENST00000555890 TRGV11A0A075B6L2 103 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 IGHV4-30-2A0A087WSY4 118 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 CENPVL3A0A0U1RRI6 287 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 NCBP2LA6PVI3 153 aaKnown RBP5.38□□□□□ -1.55
SLIRP-204ENST00000555890 B4DSR2 109 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 C9JQL5 133 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 SPRY2O43597 315 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 NDUFS6O75380 124 aaKnown RBP5.38□□□□□ -1.55
SLIRP-204ENST00000555890 SCO1O75880 301 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 YIF1AO95070 293 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 CXorf1O96002 111 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 REG1AP05451 166 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 ADCYAP1P18509 176 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 OR10J1P30954 320 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 SAA4P35542 130 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 SLURP1P55000 103 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 SELENOTP62341 195 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 BTN1A1Q13410 526 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 995.2 ms