RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 TRPT1Q86TN4 253 aaKnown RBP6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 ENKURQ8TC29 256 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 RNASEH2CQ8TDP1 164 aaKnown RBP6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 METTL26Q96S19 204 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 C11orf68Q9H3H3 251 aaKnown RBP6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 HEYLQ9NQ87 328 aaPredicted RBP6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 MCUBQ9NWR8 336 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 SHPKQ9UHJ6 478 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 DNAH11Q96DT5 4516 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 RYR1P21817 5038 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 RPS10-NUDT3A0A1W2PQS6 291 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 KNCNA6PVL3 124 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 MPTX1A8MV57 137 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 PITX3O75364 302 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 CA1P00915 261 aaPredicted RBP6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 ZNF688P0C7X2 276 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 SLC25A4P12235 298 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 AKR1C4P17516 323 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 NPPCP23582 126 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 OR10J1P30954 320 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 CEMP1Q6PRD7 247 aaPredicted RBP6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 C16orf54Q6UWD8 224 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 NRARPQ7Z6K4 114 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 Q8NAQ8 132 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 STXBP6Q8NFX7 210 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 OR1S2Q8NGQ3 325 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 GATAD1Q8WUU5 269 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 NPIPB3Q92617 1050 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 MARVELD1Q9BSK0 173 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 RBKSQ9H477 322 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 RABAC1Q9UI14 185 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 SCP2D1Q9UJQ7 156 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 TBC1D24Q9ULP9 559 aa6.78□□□□□ -1.32
VIPAS39-207ENST00000555854 FAM240BA0A1B0GVZ2 78 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 NUPR2A6NF83 97 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 NAP1L6A6NFF2 107 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 BOLA2-SMG1P6H3BVE0 249 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 DNASE2O00115 360 aaPredicted RBP6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 DEFB4AO15263 64 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 LYRM1O43325 122 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 TOMM40O96008 361 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 IL4P05112 153 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 CD5P06127 495 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 CCR6P51684 374 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 AP3S2P59780 193 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 NANOS2P60321 138 aaKnown RBP6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 YPEL3P61236 119 aaPredicted RBP6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 PAFAH1B2P68402 229 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 SMCO1Q147U7 214 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 BAK1Q16611 211 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 GSG1LQ6UXU4 331 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 DTD1Q8TEA8 209 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 ACY3Q96HD9 319 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 GRAMD2BQ96HH9 432 aa6.77□□□□□ -1.33
VIPAS39-207ENST00000555854 IGKV1OR2-108A0A075B7D4 117 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 TRAV30A0A087WSZ9 112 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 A0A1W2PS18 150 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 PRSS46E5RG02 174 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 BUB3O43684 328 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 S100A1P23297 94 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 CMC4P56277 68 aaPredicted RBP6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 RPL11P62913 178 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 PPP1R1AQ13522 171 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 XP32Q5T750 250 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 TMED4Q7Z7H5 227 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 LGI3Q8N145 548 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 LRTM2Q8N967 370 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 OR11H2Q8NH07 326 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 PHLDA1Q8WV24 401 aaPredicted RBP6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 RARRES2Q99969 163 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 TMEM231Q9H6L2 316 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 X6R8D5 127 aa6.76□□□□□ -1.33
VIPAS39-207ENST00000555854 FAM90A26D6RGX4 464 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 RGS13O14921 159 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 PLA2G10O15496 165 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 IFNA10P01566 189 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 RBMY1A1P0DJD3 496 aaKnown RBP6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 RBMY1CP0DJD4 496 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 IAPPP10997 89 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 PSG1P11464 419 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 DEFB1P60022 68 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 ZNF90Q03938 601 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 GAMTQ14353 236 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 RBMY1FQ15415 496 aaKnown RBP6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 TCTE3Q8IZS6 198 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 TOMM5Q8N4H5 51 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 CSNK1G2-AS1Q8NCQ2 148 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 OR51G1Q8NGK1 321 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 Q8WTZ3 238 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 RNF125Q96EQ8 232 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 KCNIP3Q9Y2W7 256 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 U3KQ87 197 aa6.75□□□□□ -1.33
VIPAS39-207ENST00000555854 IGHV4-28A0A0C4DH34 117 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 DUXBA0A1W2PPF3 345 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 ZNF705EA8MWA4 302 aaPredicted RBP6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 SOCS3O14543 225 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 PRAF2O60831 178 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 SCGB2A1O75556 95 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 SFT2D2O95562 160 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 LY6G6CO95867 125 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms