RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 TRAV6A0A075B6T7 132 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 TRAV2A0A0B4J234 112 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 ZFP92A6NM28 416 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 IFNA21P01568 189 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 LYL1P12980 280 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 DEFA1P59665 94 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 DEFA3P59666 94 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 RGS21Q2M5E4 152 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 SPANXN5Q5MJ07 72 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 STXBP6Q8NFX7 210 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 OR51G1Q8NGK1 321 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 GLMPQ8WWB7 406 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 NARS2Q96I59 477 aaKnown RBP15.14■□□□□ 0.01
VTI1B-205ENST00000555543 NUDT15Q9NV35 164 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 TBC1D24Q9ULP9 559 aa15.14■□□□□ 0.01
VTI1B-205ENST00000555543 IGKV1OR2-108A0A075B7D4 117 aa15.13■□□□□ 0.01
VTI1B-205ENST00000555543 APOC4P55056 127 aa15.13■□□□□ 0.01
VTI1B-205ENST00000555543 ZFAND6Q6FIF0 208 aa15.13■□□□□ 0.01
VTI1B-205ENST00000555543 C16orf54Q6UWD8 224 aa15.13■□□□□ 0.01
VTI1B-205ENST00000555543 RNF125Q96EQ8 232 aa15.13■□□□□ 0.01
VTI1B-205ENST00000555543 GRAMD2BQ96HH9 432 aa15.13■□□□□ 0.01
VTI1B-205ENST00000555543 K7EQG2 157 aa15.12■□□□□ 0.01
VTI1B-205ENST00000555543 SSSCA1O60232 199 aa15.12■□□□□ 0.01
VTI1B-205ENST00000555543 NKX2-1P43699 371 aaPredicted RBP15.12■□□□□ 0.01
VTI1B-205ENST00000555543 CMC4P56277 68 aaPredicted RBP15.12■□□□□ 0.01
VTI1B-205ENST00000555543 DEFB131AP59861 70 aa15.12■□□□□ 0.01
VTI1B-205ENST00000555543 RPP30P78346 268 aaKnown RBP15.12■□□□□ 0.01
VTI1B-205ENST00000555543 ASAH1Q13510 395 aa15.12■□□□□ 0.01
VTI1B-205ENST00000555543 IAH1Q2TAA2 248 aaPredicted RBP15.12■□□□□ 0.01
VTI1B-205ENST00000555543 DEFB135Q30KP9 77 aa15.12■□□□□ 0.01
VTI1B-205ENST00000555543 LEMD1Q68G75 181 aa15.12■□□□□ 0.01
VTI1B-205ENST00000555543 KIR2DL5BA0A0G2JN68 375 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 KIR2DL5BA0A0G2JPC4 375 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 KIR2DL5AQ8N109 375 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 THAP8Q8NA92 274 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 KIR2DL5BQ8NHK3 375 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 DCANP1Q8TF63 244 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 SEC22CQ9BRL7 303 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 PBDC1Q9BVG4 233 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 STRAPQ9Y3F4 350 aaKnown RBP15.11■□□□□ 0.01
VTI1B-205ENST00000555543 TENM2Q9NT68 2774 aa15.11■□□□□ 0.01
VTI1B-205ENST00000555543 RYR2Q92736 4967 aa15.1■□□□□ 0.01
VTI1B-205ENST00000555543 CCSO14618 274 aa15.1■□□□□ 0.01
VTI1B-205ENST00000555543 BUB3O43684 328 aa15.1■□□□□ 0.01
VTI1B-205ENST00000555543 OR2F1Q13607 317 aa15.1■□□□□ 0.01
VTI1B-205ENST00000555543 ACOT7LQ6ZUV0 252 aa15.1■□□□□ 0.01
VTI1B-205ENST00000555543 Q6ZWC4 215 aa15.1■□□□□ 0.01
VTI1B-205ENST00000555543 ZBTB8BQ8NAP8 495 aaPredicted RBP15.1■□□□□ 0.01
VTI1B-205ENST00000555543 TRGV9Q99603 122 aa15.1■□□□□ 0.01
VTI1B-205ENST00000555543 LYSTQ99698 3801 aa15.09■□□□□ 0.01
VTI1B-205ENST00000555543 UBE2CO00762 179 aa15.09■□□□□ 0.01
VTI1B-205ENST00000555543 SCGB1D2O95969 90 aa15.09■□□□□ 0.01
VTI1B-205ENST00000555543 ZNF688P0C7X2 276 aa15.09■□□□□ 0.01
VTI1B-205ENST00000555543 EIF2B2P49770 351 aaKnown RBP15.09■□□□□ 0.01
VTI1B-205ENST00000555543 PAX9P55771 341 aa15.09■□□□□ 0.01
VTI1B-205ENST00000555543 STPG3Q8N7X2 389 aa15.09■□□□□ 0.01
VTI1B-205ENST00000555543 PSENENQ9NZ42 101 aa15.09■□□□□ 0.01
VTI1B-205ENST00000555543 TP53TG1Q9Y2A0 90 aa15.09■□□□□ 0.01
VTI1B-205ENST00000555543 RCL1Q9Y2P8 373 aaKnown RBP15.09■□□□□ 0.01
VTI1B-205ENST00000555543 HELTA6NFD8 242 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 SPRY2O43597 315 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 CCNKO75909 580 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 PTTG1O95997 202 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 LYZP61626 148 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 OXA1LQ15070 435 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 OR8G2PQ6IF36 304 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 ZNF431Q8TF32 576 aaPredicted RBP15.08■□□□□ 0
VTI1B-205ENST00000555543 SMIM8Q96KF7 97 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 GSKIPQ9P0R6 139 aa15.08■□□□□ 0
VTI1B-205ENST00000555543 SACSQ9NZJ4 4579 aa15.07■□□□□ 0
VTI1B-205ENST00000555543 FAM240BA0A1B0GVZ2 78 aa15.07■□□□□ 0
VTI1B-205ENST00000555543 PMS2P5A8MQ11 134 aa15.07■□□□□ 0
VTI1B-205ENST00000555543 H2AFB2P0C5Z0 115 aa15.07■□□□□ 0
VTI1B-205ENST00000555543 RNF183Q96D59 192 aa15.07■□□□□ 0
VTI1B-205ENST00000555543 MBPP02686 304 aaPredicted RBP15.06■□□□□ 0
VTI1B-205ENST00000555543 FABP1P07148 127 aa15.06■□□□□ 0
VTI1B-205ENST00000555543 AKR1C1Q04828 323 aa15.06■□□□□ 0
VTI1B-205ENST00000555543 MZT2BQ6NZ67 158 aa15.06■□□□□ 0
VTI1B-205ENST00000555543 TMEM14EPQ6UXP3 125 aa15.06■□□□□ 0
VTI1B-205ENST00000555543 SIGLEC15Q6ZMC9 328 aa15.06■□□□□ 0
VTI1B-205ENST00000555543 CSTL1Q9H114 145 aa15.06■□□□□ 0
VTI1B-205ENST00000555543 SNRPGP15A8MWD9 76 aa15.05■□□□□ -0
VTI1B-205ENST00000555543 GATA2P23769 480 aaPredicted RBP15.05■□□□□ -0
VTI1B-205ENST00000555543 AP2S1P53680 142 aaPredicted RBP15.05■□□□□ -0
VTI1B-205ENST00000555543 TMEM182Q6ZP80 229 aaPredicted RBP15.05■□□□□ -0
VTI1B-205ENST00000555543 RAB40CQ96S21 281 aa15.05■□□□□ -0
VTI1B-205ENST00000555543 NRN1Q9NPD7 142 aa15.05■□□□□ -0
VTI1B-205ENST00000555543 KNCNA6PVL3 124 aa15.04■□□□□ -0
VTI1B-205ENST00000555543 METTL15P1P0C7V9 234 aa15.04■□□□□ -0
VTI1B-205ENST00000555543 NUP62P37198 522 aaPredicted RBP15.04■□□□□ -0
VTI1B-205ENST00000555543 Q6ZNX1 250 aa15.04■□□□□ -0
VTI1B-205ENST00000555543 C12orf45Q8N5I9 185 aaPredicted RBP15.04■□□□□ -0
VTI1B-205ENST00000555543 A0A0J9YWU9 116 aa15.03■□□□□ -0
VTI1B-205ENST00000555543 SMCO3A2RU48 225 aa15.03■□□□□ -0
VTI1B-205ENST00000555543 C7orf66A4D0T2 115 aa15.03■□□□□ -0
VTI1B-205ENST00000555543 FAM25EA8MYX2 175 aa15.03■□□□□ -0
VTI1B-205ENST00000555543 RRAS2P62070 204 aaPredicted RBP15.03■□□□□ -0
VTI1B-205ENST00000555543 EWSR1Q01844 656 aaKnown RBP eCLIP15.03■□□□□ -0
VTI1B-205ENST00000555543 PSMG4Q5JS54 123 aa15.03■□□□□ -0
VTI1B-205ENST00000555543 TMEM144Q7Z5S9 345 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms