RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 M0QX08 132 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 CCL16O15467 120 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 CYB5BO43169 146 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 DCTN3O75935 186 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 OR2J2O76002 312 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 OR5G3P0C626 314 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 HIST1H1TP22492 207 aaPredicted RBP0.06□□□□□ -2.4
SRP54-207ENST00000555535 SPINK7P58062 85 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 PSME3P61289 254 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 C6orf52Q5T4I8 152 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 C20orf196Q8IYI0 205 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 PLPP5Q8NEB5 264 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 SLC30A7Q8NEW0 376 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 OR2T10Q8NGZ9 312 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 PTH2Q96A98 100 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 SLAMF6Q96DU3 332 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 DCUN1D1Q96GG9 259 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 C8orf76Q96K31 380 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 CFAP53Q96M91 514 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 TSPAN32Q96QS1 320 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 WFDC10AQ9H1F0 79 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 FBXO5Q9UKT4 447 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 TNFSF18Q9UNG2 199 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 HS3ST2Q9Y278 367 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 KCPQ6ZWJ8 1503 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 ADGRB2O60241 1585 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 TRPM7Q96QT4 1865 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 ATG2AQ2TAZ0 1938 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 SNAPC4Q5SXM2 1469 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 hCG_1818297A0A087WSY0 165 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 TRAV26-2A0A0B4J265 109 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 IGHV1-58A0A0C4DH39 117 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 TCRBV4S1A1TA0A5B7 111 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 A8MT66 165 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 H3BRM9 83 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 CHP2O43745 196 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 TIMM17BO60830 172 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 LYPLA2O95372 231 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 IGLV3-1P01715 115 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 HIST1H1EP10412 219 aaKnown RBP0.05□□□□□ -2.4
SRP54-207ENST00000555535 ANP32AP39687 249 aaKnown RBP0.05□□□□□ -2.4
SRP54-207ENST00000555535 YPEL3P61236 119 aaPredicted RBP0.05□□□□□ -2.4
SRP54-207ENST00000555535 DYNLT1P63172 113 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 CIRBPQ14011 172 aaKnown RBP0.05□□□□□ -2.4
SRP54-207ENST00000555535 COTL1Q14019 142 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 TSNQ15631 228 aaKnown RBP0.05□□□□□ -2.4
SRP54-207ENST00000555535 SPINK9Q5DT21 86 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 KRTAP26-1Q6PEX3 210 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 Q86TA4 180 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 SLC25A40Q8TBP6 338 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 TEX47Q8TBZ9 253 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 C4orf3Q8WVX3 66 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 PRADC1Q9BSG0 188 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 MIXL1Q9H2W2 232 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 TMEM138Q9NPI0 162 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 C14orf132Q9NPU4 83 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 NHP2Q9NX24 153 aaKnown RBP0.05□□□□□ -2.4
SRP54-207ENST00000555535 MED29Q9NX70 200 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 ORMDL1Q9P0S3 153 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 PTPRZ1P23471 2315 aaPredicted RBP0.05□□□□□ -2.4
SRP54-207ENST00000555535 MAST4O15021 2626 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 MACF1Q9UPN3 7388 aaKnown RBP0.05□□□□□ -2.4
SRP54-207ENST00000555535 ROBO3Q96MS0 1386 aa0.05□□□□□ -2.4
SRP54-207ENST00000555535 C9orf84Q5VXU9 1444 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 ARHGEF11O15085 1522 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.04□□□□□ -2.4
SRP54-207ENST00000555535 C7orf71A4D174 169 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 F8W1H4 67 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 CST8O60676 142 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 CNIH1O95406 144 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 ZNF682O95780 498 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 IFNA5P01569 189 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 RBP1P09455 135 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 SMIM10L2AP0DMW4 78 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 SMIM10L2BP0DMW5 78 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 SRIP30626 198 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 SULT1A1P50225 295 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 ZNF137PP52743 207 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 TMED1Q13445 227 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 OR2F1Q13607 317 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 CCDC122Q5T0U0 273 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 HAGHLQ6PII5 290 aaPredicted RBP0.04□□□□□ -2.4
SRP54-207ENST00000555535 TEN1Q86WV5 123 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 Q8IYB0 196 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 OR5D14Q8NGL3 314 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 FAM172AQ8WUF8 416 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 PSMF1Q92530 271 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 ADAT3Q96EY9 351 aaPredicted RBP0.04□□□□□ -2.4
SRP54-207ENST00000555535 LINC00052Q96N35 136 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 OR52E6Q96RD3 313 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 CMSS1Q9BQ75 279 aaKnown RBP0.04□□□□□ -2.4
SRP54-207ENST00000555535 GGACTQ9BVM4 153 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 PLAC8Q9NZF1 115 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 PCTPQ9UKL6 214 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 MYH2Q9UKX2 1941 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 NUP155O75694 1391 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 IGF2RP11717 2491 aa0.04□□□□□ -2.4
SRP54-207ENST00000555535 SYNE1Q8NF91 8797 aaKnown RBP0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms