RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SAA2P0DJI9 122 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 RNASE2P10153 161 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 PSG9Q00887 426 aa8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 ASCL5Q7RTU5 278 aa8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 KIR3DL3Q8N743 410 aa8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 RBMXL3Q8N7X1 1067 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 GPR82Q96P67 336 aa8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 ZNF835Q9Y2P0 537 aa8.64□□□□□ -1.03
MTHFD1-210ENST00000555252 hADV38S2A0JD32 116 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 COX8AP10176 69 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 TNFRSF1AP19438 455 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 GPR183P32249 361 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 CAMPP49913 170 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 C10orf113Q5VZT2 155 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 TMEM108Q6UXF1 575 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 MLST8Q9BVC4 326 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 FREM2Q5SZK8 3169 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 CORTO00230 105 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 COX7A2P2O60397 106 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 MEF2CQ06413 473 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 RBPMS2Q6ZRY4 209 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 SLC25A48Q6ZT89 311 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 RPRMLQ8N4K4 120 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 FMC1Q96HJ9 113 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 RPUSD1Q9UJJ7 312 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 EPDR1Q9UM22 224 aa8.63□□□□□ -1.03
MTHFD1-210ENST00000555252 TEX50A0A1B0GTY4 177 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 C19orf71A6NCJ1 209 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 SRRM4A7MD48 611 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 GPR6P46095 362 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 ERHP84090 104 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 THAP8Q8NA92 274 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 OR9G1Q8NH87 305 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 FXYD5Q96DB9 178 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 CCL13Q99616 98 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 HINT2Q9BX68 163 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 ZNF430Q9H8G1 570 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 LINC00312Q9Y6C7 94 aa8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 PTPRZ1P23471 2315 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-210ENST00000555252 LOC102724200A0A096LPH7 203 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 TCRBV4S1A1TA0A5B7 111 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 IGHV3-7P01780 117 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 FAM27E3Q08E93 113 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 FAM201AQ5SY85 155 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 UFSP1Q6NVU6 142 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 C1orf229Q6ZS94 237 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 BPIFA4PQ86YQ2 179 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 GATD1Q8NB37 220 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 OR1N2Q8NGR9 330 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 OSR1Q8TAX0 266 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 LEAP2Q969E1 77 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 RNF24Q9Y225 148 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 A6NDN8 102 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 VSTM5A8MXK1 200 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 VWC2LB2RUY7 222 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 NPIPB6E9PJ23 425 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 C16orf97H3BN30 126 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 H3BRM9 83 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 HAX1O00165 279 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 PRRG2O14669 202 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 CIDEAO60543 219 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 P01737 135 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 GATA2P23769 480 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 PDPNQ86YL7 162 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 DEFB108BQ8NET1 73 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 OR4A5Q8NH83 315 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 ST6GALNAC6Q969X2 333 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 LINC00479Q96M42 142 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 CEP250Q9BV73 2442 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 FAM186AA6NE01 2351 aa8.61□□□□□ -1.03
MTHFD1-210ENST00000555252 TRAV8-6A0A0B4J262 113 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 A0A1B0GW15 77 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 C7orf71A4D174 169 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 GAGE10A6NGK3 116 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 C22orf46C9J442 243 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 TMEM238C9JI98 176 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 CHEK1O14757 476 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 KLK10O43240 276 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 FSTL3O95633 263 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 LTAP01374 205 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 NBEAP1P0C6P0 100 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 SUB1P53999 127 aaKnown RBP eCLIP8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 C5orf17Q8NAS9 161 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 PERPQ96FX8 193 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 NDUFA4L2Q9NRX3 87 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 CELSR3Q9NYQ7 3312 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 CNOT1A5YKK6 2376 aaKnown RBP8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 SIVA1O15304 175 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 APOA2P02652 100 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 CT45A6P0DMU7 189 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 CT45A5P0DMU8 189 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 CT45A7P0DMV0 189 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 HTR1DP28221 377 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 APOBEC3AP31941 199 aaPredicted RBP8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 FOXA3P55318 350 aaPredicted RBP8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
MTHFD1-210ENST00000555252 ZNF833PQ6ZTB9 187 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms