RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 RPL29P47914 159 aaKnown RBP8.3□□□□□ -1.08
TDP1-211ENST00000555178 FOXE3Q13461 319 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 AKR1C8PQ5T2L2 129 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 SPATA31B1PQ5VZV4 182 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 RPP25LQ8N5L8 163 aaKnown RBP8.3□□□□□ -1.08
TDP1-211ENST00000555178 RNF152Q8N8N0 203 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 FAM213BQ8TBF2 198 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 TRGV9Q99603 122 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 SLC25A22Q9H936 323 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 ZNF705EA8MWA4 302 aaPredicted RBP8.29□□□□□ -1.08
TDP1-211ENST00000555178 TSPAN15O95858 294 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 ZNF616Q08AN1 781 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 RAB31Q13636 194 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 MORN5Q5VZ52 161 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 Q6ZRG5 221 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 OR4X2Q8NGF9 303 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 WFDC12Q8WWY7 111 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 UHRF2Q96PU4 802 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 MDFIQ99750 246 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 TRBV7-1A0A0A6YYK4 115 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 TGOLN2O43493 480 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 SERF2P84101 59 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 KHDC1LQ5JSQ8 128 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 EIF5AL1Q6IS14 154 aaKnown RBP8.29□□□□□ -1.08
TDP1-211ENST00000555178 FAM122CQ6P4D5 195 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 PATE2Q6UY27 113 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 TMEM37Q8WXS4 190 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 RCC1LQ96I51 464 aaKnown RBP8.29□□□□□ -1.08
TDP1-211ENST00000555178 USMG5Q96IX5 58 aa8.29□□□□□ -1.08
TDP1-211ENST00000555178 SEPSECSQ9HD40 501 aaKnown RBP8.29□□□□□ -1.08
TDP1-211ENST00000555178 ELANEP08246 267 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 ORM2P19652 201 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 FCGR2BP31994 310 aaPredicted RBP8.28□□□□□ -1.08
TDP1-211ENST00000555178 LYZP61626 148 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 TMEM41BQ5BJD5 291 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 ZNF343Q6P1L6 599 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 OR10G4Q8NGN3 311 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 OR10G9Q8NGN4 311 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 OR10G7Q8NGN6 311 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 OR1B1Q8NGR6 318 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 SPATA3Q8NHX4 192 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 PBDC1Q9BVG4 233 aa8.28□□□□□ -1.08
TDP1-211ENST00000555178 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.27□□□□□ -1.08
TDP1-211ENST00000555178 BMPR1BO00238 502 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 NUPL2O15504 423 aaKnown RBP8.27□□□□□ -1.08
TDP1-211ENST00000555178 IL4P05112 153 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 RD3LP0DJH9 198 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 M6PRP20645 277 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 EDN2P20800 178 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 ARL3P36405 182 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 FGF8P55075 233 aaPredicted RBP8.27□□□□□ -1.08
TDP1-211ENST00000555178 USF2Q15853 346 aaPredicted RBP8.27□□□□□ -1.08
TDP1-211ENST00000555178 PXDC1Q5TGL8 231 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 C8orf86Q6ZUL3 223 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 OR51G1Q8NGK1 321 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 TXN2Q99757 166 aa8.27□□□□□ -1.08
TDP1-211ENST00000555178 PUS1Q9Y606 427 aaKnown RBP eCLIP8.27□□□□□ -1.08
TDP1-211ENST00000555178 CMYA5Q8N3K9 4069 aa8.27□□□□□ -1.09
TDP1-211ENST00000555178 A0A0G2JLM5 398 aa8.27□□□□□ -1.09
TDP1-211ENST00000555178 I3L521 148 aa8.27□□□□□ -1.09
TDP1-211ENST00000555178 TOMM40O96008 361 aa8.27□□□□□ -1.09
TDP1-211ENST00000555178 MIR17HGQ75NE6 70 aa8.27□□□□□ -1.09
TDP1-211ENST00000555178 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 A0A087WW49 117 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 TRAV5A0A0B4J249 113 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 UMAD1C9J7I0 102 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 ZNF207O43670 478 aaKnown RBP8.26□□□□□ -1.09
TDP1-211ENST00000555178 OR2C1O95371 312 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 OR5G3P0C626 314 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 FOXL1Q12952 345 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 ACOT6Q3I5F7 207 aaPredicted RBP8.26□□□□□ -1.09
TDP1-211ENST00000555178 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 LEMD1Q68G75 181 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 LCN15Q6UWW0 184 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 UNQ9165/PRO28630Q6UXU0 137 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 SELENOKQ9Y6D0 94 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 TRAV30A0A087WSZ9 112 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 COX7A2P2O60397 106 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 YPEL3P61236 119 aaPredicted RBP8.26□□□□□ -1.09
TDP1-211ENST00000555178 SELENOTP62341 195 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 CCL20P78556 96 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 CLLU1Q5K131 121 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 FAM78BQ5VT40 261 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 TOMM20LQ6UXN7 152 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 KLHL30-AS1Q8NEE0 82 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 RAB24Q969Q5 203 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 RNF125Q96EQ8 232 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 HRH4Q9H3N8 390 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 KCNIP2Q9NS61 270 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 ANK2Q01484 3957 aa8.26□□□□□ -1.09
TDP1-211ENST00000555178 SNRPCP09234 159 aaKnown RBP8.25□□□□□ -1.09
TDP1-211ENST00000555178 LGALS1P09382 135 aaKnown RBP8.25□□□□□ -1.09
TDP1-211ENST00000555178 CDX1P47902 265 aaPredicted RBP8.25□□□□□ -1.09
TDP1-211ENST00000555178 CDC34P49427 236 aaPredicted RBP8.25□□□□□ -1.09
TDP1-211ENST00000555178 RAX2Q96IS3 184 aa8.25□□□□□ -1.09
TDP1-211ENST00000555178 UBE2E2Q96LR5 201 aa8.25□□□□□ -1.09
TDP1-211ENST00000555178 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
TDP1-211ENST00000555178 WI2-2373I1.2A0A1W2PRP0 233 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms