RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MORN5Q5VZ52 161 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 CFAP161Q6P656 301 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 SLC35E3Q7Z769 313 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 MRPL41Q8IXM3 137 aaKnown RBP7.01□□□□□ -1.29
TDP1-210ENST00000554976 NPIPB3Q92617 1050 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 MBD6Q96DN6 1003 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 ZNF48Q96MX3 618 aaPredicted RBP7.01□□□□□ -1.29
TDP1-210ENST00000554976 PLXNB1O43157 2135 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BCP62807 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 MEF2BQ02080 365 aaPredicted RBP7.01□□□□□ -1.29
TDP1-210ENST00000554976 LOXL1Q08397 574 aaPredicted RBP7.01□□□□□ -1.29
TDP1-210ENST00000554976 FXYD3Q14802 87 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST2H2BEQ16778 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.01□□□□□ -1.29
TDP1-210ENST00000554976 MIR17HGQ75NE6 70 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 C5orf56Q8N8D9 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BHQ93079 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 PSMG3-AS1Q96PY0 264 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BNQ99877 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BMQ99879 126 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 C19orf24Q9BVV8 132 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 WNT10AQ9GZT5 417 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 CACNA1BQ00975 2339 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 CXorf1O96002 111 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 MT-CO2P00403 227 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 APELAP0DMC3 54 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 GZMBP10144 247 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 FABP4P15090 132 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 TAGLN2P37802 199 aaKnown RBP7.01□□□□□ -1.29
TDP1-210ENST00000554976 ARPC1AQ92747 370 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 SOX21Q9Y651 276 aaPredicted RBP7.01□□□□□ -1.29
TDP1-210ENST00000554976 ARL2-SNX15V9GYD0 113 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 A0A0U1RQK1 487 aa7□□□□□ -1.29
TDP1-210ENST00000554976 IGLC1P0CG04 106 aa7□□□□□ -1.29
TDP1-210ENST00000554976 RPS10P46783 165 aaKnown RBP7□□□□□ -1.29
TDP1-210ENST00000554976 RND2P52198 227 aa7□□□□□ -1.29
TDP1-210ENST00000554976 RHOBP62745 196 aa7□□□□□ -1.29
TDP1-210ENST00000554976 DEFB113Q30KQ7 82 aa7□□□□□ -1.29
TDP1-210ENST00000554976 SMIM15Q7Z3B0 74 aa7□□□□□ -1.29
TDP1-210ENST00000554976 OR4X1Q8NH49 305 aa7□□□□□ -1.29
TDP1-210ENST00000554976 RNASE8Q8TDE3 154 aaKnown RBP7□□□□□ -1.29
TDP1-210ENST00000554976 YTHDF2Q9Y5A9 579 aaKnown RBP7□□□□□ -1.29
TDP1-210ENST00000554976 TRAV40A0A0B4J280 105 aa7□□□□□ -1.29
TDP1-210ENST00000554976 B4DSR2 109 aa7□□□□□ -1.29
TDP1-210ENST00000554976 TMEM250H0YL14 139 aa7□□□□□ -1.29
TDP1-210ENST00000554976 H3BQ15 152 aa7□□□□□ -1.29
TDP1-210ENST00000554976 FAM106CPP0CH98 169 aa7□□□□□ -1.29
TDP1-210ENST00000554976 GCHFRP30047 84 aa7□□□□□ -1.29
TDP1-210ENST00000554976 RAB31Q13636 194 aa7□□□□□ -1.29
TDP1-210ENST00000554976 ACY3Q96HD9 319 aa7□□□□□ -1.29
TDP1-210ENST00000554976 FAM103A1Q9BTL3 118 aaKnown RBP7□□□□□ -1.29
TDP1-210ENST00000554976 MRPL32Q9BYC8 188 aaKnown RBP7□□□□□ -1.29
TDP1-210ENST00000554976 IFNA1P01562 189 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 IGHV3-48P01763 117 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 GATA3P23771 443 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 BMI1P35226 326 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 CELSR1Q9NYQ6 3014 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 K7EP13 123 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 M0R036 132 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 PAGE4O60829 102 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 PPBPP02775 128 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 FCGR2BP31994 310 aaPredicted RBP6.99□□□□□ -1.29
TDP1-210ENST00000554976 ATP5G3P48201 142 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 ERVFC1-1P60608 527 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 HES1Q14469 280 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 TMEM95Q3KNT9 176 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 SOHLH1Q5JUK2 328 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 GFI1BQ5VTD9 330 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 OR1L6Q8NGR2 347 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 SGMS2Q8NHU3 365 aa6.99□□□□□ -1.29
TDP1-210ENST00000554976 TRBV9A0A0B4J1U6 114 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 ACTL6BO94805 426 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 GCGP01275 180 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 PLGLAQ15195 96 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 ZNF343Q6P1L6 599 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 BRD3OSQ6XYD6 125 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 LINC01356Q8N9X3 169 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 C11orf52Q96A22 123 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 SDF2L1Q9HCN8 221 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 A0A087WWC5 75 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 A0A1W2PPV4 95 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 A6NDX4 124 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 OR2C1O95371 312 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 IGKV1-17P01599 117 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 IGHV4-31P0DP07 118 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 BRS3P32247 399 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 SELENOTP62341 195 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 LINC01548A6NM66 108 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 TGOLN2O43493 480 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 MYCNOSP40205 109 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 FAM78BQ5VT40 261 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 NUDT10Q8NFP7 164 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 FAM110DQ8TAY7 271 aaPredicted RBP6.98□□□□□ -1.29
TDP1-210ENST00000554976 RNF2Q99496 336 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms