RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 RNASE11Q8TAA1 199 aaKnown RBP3.41□□□□□ -1.86
FCF1-207ENST00000554973 ADAT1Q9BUB4 502 aaKnown RBP3.41□□□□□ -1.86
FCF1-207ENST00000554973 TCEAL2Q9H3H9 227 aaPredicted RBP3.41□□□□□ -1.86
FCF1-207ENST00000554973 CACYBPQ9HB71 228 aaKnown RBP3.41□□□□□ -1.86
FCF1-207ENST00000554973 POPDC3Q9HBV1 291 aa3.41□□□□□ -1.86
FCF1-207ENST00000554973 RNF11Q9Y3C5 154 aa3.41□□□□□ -1.86
FCF1-207ENST00000554973 SOGA1O94964 1423 aa3.41□□□□□ -1.86
FCF1-207ENST00000554973 KIF26AQ9ULI4 1882 aaPredicted RBP3.41□□□□□ -1.86
FCF1-207ENST00000554973 GPR179Q6PRD1 2367 aa3.4□□□□□ -1.86
FCF1-207ENST00000554973 A0A0J9YX75 114 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 C7orf71A4D174 169 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 NDUFB3O43676 98 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 TNFSF15O95150 251 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 CXCL1P09341 107 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 UBBP0CG47 229 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 MPC1LP0DKB6 136 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 COX6A1P12074 109 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 CMPK1P30085 196 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 FUSP35637 526 aaKnown RBP eCLIP3.4□□□□□ -1.87
FCF1-207ENST00000554973 VMA21Q3ZAQ7 101 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 FAM27BQ5VT28 67 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 DPPA3Q6W0C5 159 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 ANKRD31Q8N7Z5 1873 aa3.4□□□□□ -1.87
FCF1-207ENST00000554973 PRRC2AP48634 2157 aaKnown RBP3.39□□□□□ -1.87
FCF1-207ENST00000554973 TRBV7-6A0A0J9YX20 115 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 RFPL4AA6NLU0 287 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 C9JAW5 83 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 RFPL4AL1F8VTS6 287 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 J3QQQ9 107 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 LYZL6O75951 148 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 DPM2O94777 84 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 OR2H2O95918 312 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 SDC2P34741 201 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 LINC00315P59091 139 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 MSMO1Q15800 293 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 LY6EQ16553 131 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 PYDC2Q56P42 97 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 PHF5AQ7RTV0 110 aaKnown RBP3.39□□□□□ -1.87
FCF1-207ENST00000554973 TCTE3Q8IZS6 198 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 CMTM2Q8TAZ6 248 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 LXNQ9BS40 222 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 MARCOQ9UEW3 520 aaPredicted RBP3.39□□□□□ -1.87
FCF1-207ENST00000554973 HIGD1AQ9Y241 93 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 RIMBP3CA6NJZ7 1639 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 RIMBP3BA6NNM3 1639 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 RIMBP3Q9UFD9 1639 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 CEP164Q9UPV0 1460 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 ARHGAP32A7KAX9 2087 aa3.39□□□□□ -1.87
FCF1-207ENST00000554973 ARHGEF28Q8N1W1 1705 aaKnown RBP3.39□□□□□ -1.87
FCF1-207ENST00000554973 RFX7Q2KHR2 1363 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 G3V3Q6 166 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 C1QCP02747 245 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 DEFA4P12838 97 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 TMBIM6P55061 237 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 ARPP19P56211 112 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 NDUFA6P56556 154 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 HBBP68871 147 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 MYL5Q02045 173 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 DEFB134Q4QY38 66 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 DEDD2Q8WXF8 326 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 PRADC1Q9BSG0 188 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 NPCDR1Q9BY65 106 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 CYTL1Q9NRR1 136 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 A2MP01023 1474 aa3.38□□□□□ -1.87
FCF1-207ENST00000554973 IGHV3-64A0A075B6Q5 118 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 IGHV1-18A0A0C4DH31 117 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 IGHV1-58A0A0C4DH39 117 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 LOC107984640A0A0U1RRK4 108 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 A0A1W2PNM2 257 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 HIST1H2BKO60814 126 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 NAPSAO96009 420 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 CLPSP04118 112 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 HIST1H2BJP06899 126 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 HTR1AP08908 422 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 HLA-EP13747 358 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 RPL35P42766 123 aaKnown RBP3.37□□□□□ -1.87
FCF1-207ENST00000554973 NDUFA5Q16718 116 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 KRTAP13-2Q52LG2 175 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 LRRC28Q86X40 367 aaPredicted RBP3.37□□□□□ -1.87
FCF1-207ENST00000554973 PDZD9Q8IXQ8 264 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 PSORS1C2Q9UIG4 136 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 HS3ST2Q9Y278 367 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 NUP98P52948 1817 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 TRPM1Q7Z4N2 1603 aa3.37□□□□□ -1.87
FCF1-207ENST00000554973 WDR7Q9Y4E6 1490 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 N4BP2Q86UW6 1770 aaPredicted RBP3.36□□□□□ -1.87
FCF1-207ENST00000554973 C5orf58C9J3I9 102 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 K7EP13 123 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 PGLYRP1O75594 196 aaPredicted RBP3.36□□□□□ -1.87
FCF1-207ENST00000554973 SULT1C4O75897 302 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 FABP2P12104 132 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 Q5XG85 94 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 EIF5AL1Q6IS14 154 aaKnown RBP3.36□□□□□ -1.87
FCF1-207ENST00000554973 SOSTDC1Q6X4U4 206 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 SH2D6Q7Z4S9 175 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 DEFB128Q7Z7B8 93 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 CGREF1Q99674 301 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 NHP2Q9NX24 153 aaKnown RBP3.36□□□□□ -1.87
FCF1-207ENST00000554973 FER1L6Q2WGJ9 1857 aa3.36□□□□□ -1.87
FCF1-207ENST00000554973 MYO16Q9Y6X6 1858 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms