RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 WT1-ASQ06250 92 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 IGFL2Q6UWQ7 119 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 TMEM108Q6UXF1 575 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 TCF24Q7RTU0 167 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 NUP35Q8NFH5 326 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 GRAMD2BQ96HH9 432 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 IGF2BP2-AS1Q96M15 143 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 TNFRSF19Q9NS68 423 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 NAV3Q8IVL0 2385 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 PPIAL4EA0A075B759 164 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 HIGD1CA8MV81 97 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 PPIAL4DF5H284 164 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 PPIAL4FP0DN26 164 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 HIST1H1EP10412 219 aaKnown RBP7.69□□□□□ -1.18
SYNE2-213ENST00000554805 ZNF137PP52743 207 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 PRRX1P54821 245 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 TNXAQ16473 311 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 LRRC10Q5BKY1 277 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 TMEM200BQ69YZ2 307 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 DYNLRB1Q9NP97 96 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 ASCL3Q9NQ33 180 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 PTPRBP23467 1997 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 TCRBV4S1A1TA0A5B7 111 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 COMPP49747 757 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-213ENST00000554805 HINT1P49773 126 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-213ENST00000554805 FOXA3P55318 350 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-213ENST00000554805 ZNF329Q86UD4 541 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 C18orf32Q8TCD1 76 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 CHRDL1Q9BU40 450 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 LEMD1Q68G75 181 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 C16orf54Q6UWD8 224 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 C19orf35Q6ZS72 473 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 PERPQ96FX8 193 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 CLEC7AQ9BXN2 247 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 WASHC3Q9Y3C0 194 aa7.69□□□□□ -1.18
SYNE2-213ENST00000554805 H0Y8G0 127 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 SIAH2O43255 324 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 TCF21O43680 179 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 PRB4P10163 310 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-213ENST00000554805 MAJINQ3KP22 176 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 TMEM30BQ3MIR4 351 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 PATE2Q6UY27 113 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 ZNF833PQ6ZTB9 187 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 NIT1Q86X76 327 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 MRPL36Q9P0J6 103 aaKnown RBP7.68□□□□□ -1.18
SYNE2-213ENST00000554805 DMRTA1Q5VZB9 504 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 LYPD2Q6UXB3 125 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 SPACA3Q8IXA5 215 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 PNKDQ8N490 385 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 TMEM167AQ8TBQ9 72 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 TPSG1Q9NRR2 321 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 C17orf100A8MU93 164 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 VSTM5A8MXK1 200 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 HYPMO75409 117 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 NBEAP1P0C6P0 100 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 TMEM177Q53S58 311 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 EPDR1Q9UM22 224 aa7.68□□□□□ -1.18
SYNE2-213ENST00000554805 C16orf97H3BN30 126 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 P01737 135 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 CD24P25063 80 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 LYZP61626 148 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 MEF2CQ06413 473 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-213ENST00000554805 PMCHL1Q16048 86 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 OR5AN1Q8NGI8 311 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 SCNM1Q9BWG6 230 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 GSX1Q9H4S2 264 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-213ENST00000554805 CLEC5AQ9NY25 188 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 LAMTOR2Q9Y2Q5 125 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 M0QZ24 198 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 IGLC2P0DOY2 106 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 IGLC3P0DOY3 106 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 DLX1P56177 255 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 PLGLAQ15195 96 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 OR8B2Q96RD0 313 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 DYSFO75923 2080 aa7.67□□□□□ -1.18
SYNE2-213ENST00000554805 A0A1W2PPI3 338 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 SH2D7A6NKC9 451 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-213ENST00000554805 CHEK1O14757 476 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 FAM87AP0C7U9 286 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 RPL27AP46776 148 aaKnown RBP7.66□□□□□ -1.18
SYNE2-213ENST00000554805 GDF5OSQ5U4N7 250 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 Q8N976 141 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 TMEM186Q96B77 213 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 FXYD5Q96DB9 178 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 TEX36Q5VZQ5 186 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 ETFRF1Q6IPR1 90 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 ST6GALNAC6Q969X2 333 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 A8MWL6 223 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 BSPH1Q075Z2 132 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 ADIPOQQ15848 244 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 STPG4Q8N801 248 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 STXBP6Q8NFX7 210 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 RITA1Q96K30 269 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 GPR82Q96P67 336 aa7.66□□□□□ -1.18
SYNE2-213ENST00000554805 FAM181BA6NEQ2 426 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 K7EM74 188 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 PRRG2O14669 202 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 RBP4P02753 201 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 CSN3P07498 182 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms