RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SAV1Q9H4B6 383 aaPredicted RBP17.24■□□□□ 0.35
FOXA1-204ENST00000554607 CACNG5Q9UF02 275 aa17.24■□□□□ 0.35
FOXA1-204ENST00000554607 A0A087WXM4 84 aa17.23■□□□□ 0.35
FOXA1-204ENST00000554607 TEX13DA0A0J9YY54 714 aaPredicted RBP17.23■□□□□ 0.35
FOXA1-204ENST00000554607 IGKV3-20P01619 116 aa17.23■□□□□ 0.35
FOXA1-204ENST00000554607 PSG1P11464 419 aa17.23■□□□□ 0.35
FOXA1-204ENST00000554607 GDF5OSQ5U4N7 250 aa17.23■□□□□ 0.35
FOXA1-204ENST00000554607 FOXI2Q6ZQN5 318 aa17.23■□□□□ 0.35
FOXA1-204ENST00000554607 OR51G1Q8NGK1 321 aa17.23■□□□□ 0.35
FOXA1-204ENST00000554607 MARCH1Q8TCQ1 289 aa17.23■□□□□ 0.35
FOXA1-204ENST00000554607 LINC00052Q96N35 136 aa17.23■□□□□ 0.35
FOXA1-204ENST00000554607 TNFAIP8O95379 198 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 OR5AC1P0C628 307 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 RORCP51449 518 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 FXYD7P58549 80 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 TAS2R19P59542 299 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 NCS1P62166 190 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 SPATA31B1PQ5VZV4 182 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 ZNF575Q86XF7 245 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 TMEM229BQ8NBD8 167 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 GLYATL2Q8WU03 294 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 C15orf40Q8WUR7 153 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 GPR146Q96CH1 333 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 C14orf166Q9Y224 244 aaKnown RBP17.22■□□□□ 0.35
FOXA1-204ENST00000554607 GOLT1BQ9Y3E0 138 aa17.22■□□□□ 0.35
FOXA1-204ENST00000554607 NXPH3O95157 252 aa17.21■□□□□ 0.35
FOXA1-204ENST00000554607 RAB3DO95716 219 aa17.21■□□□□ 0.35
FOXA1-204ENST00000554607 HTN3P15516 51 aa17.21■□□□□ 0.35
FOXA1-204ENST00000554607 OR8G2PQ6IF36 304 aa17.21■□□□□ 0.35
FOXA1-204ENST00000554607 SELENOHQ8IZQ5 122 aaKnown RBP17.21■□□□□ 0.35
FOXA1-204ENST00000554607 OR4D10Q8NGI6 311 aa17.21■□□□□ 0.35
FOXA1-204ENST00000554607 TMEM170AQ8WVE7 144 aa17.21■□□□□ 0.35
FOXA1-204ENST00000554607 RNF125Q96EQ8 232 aa17.21■□□□□ 0.35
FOXA1-204ENST00000554607 HBE1P02100 147 aa17.2■□□□□ 0.34
FOXA1-204ENST00000554607 PSMB3P49720 205 aa17.2■□□□□ 0.34
FOXA1-204ENST00000554607 VBP1P61758 197 aa17.2■□□□□ 0.34
FOXA1-204ENST00000554607 OR4B1Q8NGF8 309 aa17.2■□□□□ 0.34
FOXA1-204ENST00000554607 COQ8AQ8NI60 647 aa17.2■□□□□ 0.34
FOXA1-204ENST00000554607 LHFPL5Q8TAF8 219 aa17.2■□□□□ 0.34
FOXA1-204ENST00000554607 NAA60Q9H7X0 242 aa17.2■□□□□ 0.34
FOXA1-204ENST00000554607 FAM3BP58499 235 aaPredicted RBP17.19■□□□□ 0.34
FOXA1-204ENST00000554607 NMSQ5H8A3 153 aa17.19■□□□□ 0.34
FOXA1-204ENST00000554607 STEAP1BQ6NZ63 245 aa17.19■□□□□ 0.34
FOXA1-204ENST00000554607 ZNF709Q8N972 641 aa17.19■□□□□ 0.34
FOXA1-204ENST00000554607 AP3S1Q92572 193 aa17.19■□□□□ 0.34
FOXA1-204ENST00000554607 C7orf50Q9BRJ6 194 aaKnown RBP17.19■□□□□ 0.34
FOXA1-204ENST00000554607 PBDC1Q9BVG4 233 aa17.19■□□□□ 0.34
FOXA1-204ENST00000554607 FUNDC2Q9BWH2 189 aa17.19■□□□□ 0.34
FOXA1-204ENST00000554607 EXTL2Q9UBQ6 330 aa17.19■□□□□ 0.34
FOXA1-204ENST00000554607 U3KQ87 197 aa17.19■□□□□ 0.34
FOXA1-204ENST00000554607 DEFB1P60022 68 aa17.18■□□□□ 0.34
FOXA1-204ENST00000554607 PSG9Q00887 426 aa17.18■□□□□ 0.34
FOXA1-204ENST00000554607 KLF9Q13886 244 aaPredicted RBP17.18■□□□□ 0.34
FOXA1-204ENST00000554607 C1orf194Q5T5A4 169 aa17.18■□□□□ 0.34
FOXA1-204ENST00000554607 TMEM268Q5VZI3 342 aa17.18■□□□□ 0.34
FOXA1-204ENST00000554607 EBLN2Q6P2I7 272 aa17.18■□□□□ 0.34
FOXA1-204ENST00000554607 RTBDNQ9BSG5 229 aaPredicted RBP17.18■□□□□ 0.34
FOXA1-204ENST00000554607 KRTAP4-5Q9BYR2 181 aa17.18■□□□□ 0.34
FOXA1-204ENST00000554607 WDR12Q9GZL7 423 aaKnown RBP17.18■□□□□ 0.34
FOXA1-204ENST00000554607 PLA2G2EQ9NZK7 142 aa17.18■□□□□ 0.34
FOXA1-204ENST00000554607 LOC102723971A0A1B0GUV8 181 aa17.17■□□□□ 0.34
FOXA1-204ENST00000554607 SURF2Q15527 256 aaPredicted RBP17.17■□□□□ 0.34
FOXA1-204ENST00000554607 ZNF79Q15937 498 aa17.17■□□□□ 0.34
FOXA1-204ENST00000554607 TMED3Q9Y3Q3 217 aa17.17■□□□□ 0.34
FOXA1-204ENST00000554607 YTHDF2Q9Y5A9 579 aaKnown RBP17.17■□□□□ 0.34
FOXA1-204ENST00000554607 SULT1A3P0DMM9 295 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 SULT1A4P0DMN0 295 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 PAX9P55771 341 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 SUPT4H1P63272 117 aaKnown RBP17.16■□□□□ 0.34
FOXA1-204ENST00000554607 MEF2DQ14814 521 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 RRN3P1Q2M238 152 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 SAMD13Q5VXD3 122 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 TMEM88Q6PEY1 159 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 C15orf53Q8NAA6 179 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 SLC35B3Q9H1N7 401 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 TMEM56-RWDD3S4R434 201 aa17.16■□□□□ 0.34
FOXA1-204ENST00000554607 ZFP92A6NM28 416 aa17.15■□□□□ 0.34
FOXA1-204ENST00000554607 ISLRO14498 428 aa17.15■□□□□ 0.34
FOXA1-204ENST00000554607 FABP1P07148 127 aa17.15■□□□□ 0.34
FOXA1-204ENST00000554607 DAD1P61803 113 aa17.15■□□□□ 0.34
FOXA1-204ENST00000554607 SSBP1Q04837 148 aaKnown RBP17.15■□□□□ 0.34
FOXA1-204ENST00000554607 GPR107Q5VW38 600 aa17.15■□□□□ 0.34
FOXA1-204ENST00000554607 C1orf158Q8N1D5 194 aa17.15■□□□□ 0.34
FOXA1-204ENST00000554607 HSPG2P98160 4391 aa17.14■□□□□ 0.34
FOXA1-204ENST00000554607 CRYM-AS1A6NIL9 109 aa17.14■□□□□ 0.33
FOXA1-204ENST00000554607 SOCS3O14543 225 aa17.14■□□□□ 0.33
FOXA1-204ENST00000554607 ATP5IP56385 69 aaPredicted RBP17.14■□□□□ 0.33
FOXA1-204ENST00000554607 LGI3Q8N145 548 aa17.14■□□□□ 0.33
FOXA1-204ENST00000554607 IL22RA2Q969J5 263 aa17.14■□□□□ 0.33
FOXA1-204ENST00000554607 MAGT1Q9H0U3 335 aa17.14■□□□□ 0.33
FOXA1-204ENST00000554607 NACAE9PAV3 2078 aa17.14■□□□□ 0.33
FOXA1-204ENST00000554607 DISC1C4P0D8 188 aa17.13■□□□□ 0.33
FOXA1-204ENST00000554607 GABARAPH6UMI1 98 aa17.13■□□□□ 0.33
FOXA1-204ENST00000554607 GABARAPO95166 117 aa17.13■□□□□ 0.33
FOXA1-204ENST00000554607 ZNF182P17025 639 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-204ENST00000554607 GPX4P36969 197 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-204ENST00000554607 FAM78BQ5VT40 261 aa17.13■□□□□ 0.33
FOXA1-204ENST00000554607 GSG1LQ6UXU4 331 aa17.13■□□□□ 0.33
FOXA1-204ENST00000554607 SNRPGP15A8MWD9 76 aa17.12■□□□□ 0.33
FOXA1-204ENST00000554607 OR8I2Q8N0Y5 310 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms